RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 BLVRAP53004 296 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 GUCA2AQ02747 115 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 KLRD1Q13241 179 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 LINC01590Q5TEZ4 76 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 STUMQ69YW2 141 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 CYP2R1Q6VVX0 501 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 ERI1Q8IV48 349 aaKnown RBP7.93□□□□□ -1.14
USP39-212ENST00000465514 DEFB107AQ8IZN7 70 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 PNKDQ8N490 385 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 CSNK2A3Q8NEV1 391 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 OR2T33Q8NG76 320 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 OR52H1Q8NGJ2 320 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 OR6N2Q8NGY6 317 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 C8orf46Q8TAG6 207 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 MUC7Q8TAX7 377 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 RNF133Q8WVZ7 376 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 H1FXQ92522 213 aaKnown RBP7.93□□□□□ -1.14
USP39-212ENST00000465514 RPL3LQ92901 407 aaKnown RBP7.93□□□□□ -1.14
USP39-212ENST00000465514 TNFRSF14Q92956 283 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 INTS14Q96SY0 518 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 AMELYQ99218 206 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 MICU1Q9BPX6 476 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 PAPOLGQ9BWT3 736 aaKnown RBP7.93□□□□□ -1.14
USP39-212ENST00000465514 WDR13Q9H1Z4 485 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 OR10A2Q9H208 303 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 MED20Q9H944 212 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 MED4Q9NPJ6 270 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 SNTG1Q9NSN8 517 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 ARL8BQ9NVJ2 186 aa7.93□□□□□ -1.14
USP39-212ENST00000465514 MEIOCA2RUB1 952 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 FAM183AA6NL82 134 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 ANXA2P2A6NMY6 339 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 RIIAD1A6NNX1 92 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 ZNF850A8MQ14 1090 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 SNX3O60493 162 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 PAHP00439 452 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 IFNGP01579 166 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 H2BFMP0C1H6 154 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 VSIG10L2P0DP72 767 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 ZNF3P17036 446 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 ATP6V1B2P21281 511 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 GSTT1P30711 240 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 SAA4P35542 130 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 OPRL1P41146 370 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 MAGEA2P43356 314 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 IL5RAQ01344 420 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 EMX1Q04741 257 aaPredicted RBP7.92□□□□□ -1.14
USP39-212ENST00000465514 PRDX4Q13162 271 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 MICAQ29983 383 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 SPATS1Q496A3 300 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 C11orf88Q6PI97 169 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 ZNF788Q6ZQV5 615 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 OR10Z1Q8NGY1 313 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 PPP1R35Q8TAP8 253 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 OR5P3Q8WZ94 311 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 OTULINQ96BN8 352 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 MED30Q96HR3 178 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 PGAM5Q96HS1 289 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 GAFA1Q96PS6 74 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 RAB3IPQ96QF0 476 aaPredicted RBP7.92□□□□□ -1.14
USP39-212ENST00000465514 RTL8AQ9BWD3 113 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 DGCR6LQ9BY27 220 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 DNTTIP1Q9H147 329 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 VNN3Q9NY84 501 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 SLC25A10Q9UBX3 287 aaPredicted RBP7.92□□□□□ -1.14
USP39-212ENST00000465514 TAGLN3Q9UI15 199 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 ZNF391Q9UJN7 358 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 MPC1Q9Y5U8 109 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 U3KQV3 271 aa7.92□□□□□ -1.14
USP39-212ENST00000465514 RYR1P21817 5038 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 A0A1W2PQ09 198 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 NKX6-3A6NJ46 265 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 TMEM210A6NLX4 147 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 ADARB2-AS1A8MUL3 147 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 E9PQ18 207 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 AKR7A2O43488 359 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 FBXO24O75426 580 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 GLCEO94923 617 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 CST4P01036 141 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 ACAA1P09110 424 aaPredicted RBP7.91□□□□□ -1.14
USP39-212ENST00000465514 NHLRC4P0CG21 123 aaPredicted RBP7.91□□□□□ -1.14
USP39-212ENST00000465514 CD28P10747 220 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 NDUFB7P17568 137 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 ACKR3P25106 362 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 POU1F1P28069 291 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 UBE2E1P51965 193 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 MXRA7P84157 204 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 SNCBQ16143 134 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 DGUOKQ16854 277 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 NCR3LG1Q68D85 454 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 C16orf89Q6UX73 402 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 KCTD8Q6ZWB6 473 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 SHFQ7M4L6 423 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 CPLX4Q7Z7G2 160 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 NDUFA11Q86Y39 141 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.91□□□□□ -1.14
USP39-212ENST00000465514 TIGD4Q8IY51 512 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 FTMTQ8N4E7 242 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 IQCF1Q8N6M8 205 aa7.91□□□□□ -1.14
USP39-212ENST00000465514 OR5R1Q8NH85 324 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms