RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 USF1P22415 310 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 RBMXP38159 391 aaKnown RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 MAGEB1P43366 347 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 MTNR1AP48039 350 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 CENPAP49450 140 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 GTF2A1P52655 376 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 RAP1BP61224 184 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 RAP1AP62834 184 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 DEFA6Q01524 100 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 MFGE8Q08431 387 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 SPOCK1Q08629 439 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 MED21Q13503 144 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 GGTLC2Q14390 218 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 RNPS1Q15287 305 aaKnown RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 SGCAQ16586 387 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 TBRG1Q3YBR2 411 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF672Q499Z4 452 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 TP53I3Q53FA7 332 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 CCDC92Q53HC0 331 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 TMEM255AQ5JRV8 349 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF684Q5T5D7 378 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 FBXW9Q5XUX1 488 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 HIST2H2BDQ6DRA6 164 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 TMEM154Q6P9G4 183 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 Q6ZSV7 163 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF367Q7RTV3 350 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ADCK1Q86TW2 530 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 LHFPL3Q86UP9 236 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 NAA40Q86UY6 237 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 SLC35F2Q8IXU6 374 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF100Q8IYN0 542 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 GPR137CQ8N3F9 429 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF433Q8N7K0 673 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ZFP41Q8N8Y5 198 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 OR1K1Q8NGR3 316 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 OR6N2Q8NGY6 317 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 AKR7LQ8NHP1 331 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ST7LQ8TDW4 575 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 C10orf105Q8TEF2 133 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 BCL2L2Q92843 193 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 TMIGD2Q96BF3 282 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 PLEKHA8Q96JA3 519 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 APOL4Q9BPW4 351 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 C1QTNF6Q9BXI9 259 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 LINC00470Q9BZP3 86 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 WNT5BQ9H1J7 359 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF696Q9H7X3 374 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 FGF20Q9NP95 211 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 CLN6Q9NWW5 311 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 PAQR5Q9NXK6 330 aaPredicted RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 B3GNT2Q9NY97 397 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 SLCO1C1Q9NYB5 712 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF319Q9P2F9 582 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 MRM2Q9UI43 246 aaKnown RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 EXOGQ9Y2C4 368 aaKnown RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 LSM2Q9Y333 95 aaKnown RBP3.06□□□□□ -1.92
SCFD1-204ENST00000463622 RNF115Q9Y4L5 304 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 HSPE1-MOB4S4R3N1 261 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 PRR14LQ5THK1 2151 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 NBEAL2Q6ZNJ1 2754 aa3.06□□□□□ -1.92
SCFD1-204ENST00000463622 LOC100509620A0A075B734 347 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 DPRXA6NFQ7 191 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 TRIM64CA6NLI5 447 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF99A8MXY4 864 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 H3BSH0 61 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 RPL36A-HNRNPH2H7BZ11 118 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF593O00488 134 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 GPR171O14626 319 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SRSF10O75494 262 aaKnown RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PNPP00491 289 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 CDK1P06493 297 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OR8G3PP0DMU2 310 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SLC2A1P11166 492 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ALOX5APP20292 161 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PSMB10P40306 273 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 OR12D2P58182 307 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 CXCR4P61073 352 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 HIST1H3AP68431 136 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 MRPS34P82930 218 aaKnown RBP3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PSG4Q00888 419 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 HSF2Q03933 536 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ST3GAL4Q11206 333 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 INSL4Q14641 139 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 GABRA6Q16445 453 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 PCK2Q16822 640 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 THEM4Q5T1C6 240 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 HIST2H3PS2Q5TEC6 136 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 FAM205BPQ63HN1 556 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 C11orf71Q6IPW1 123 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 FAM166AQ6J272 317 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 KRT80Q6KB66 452 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 ZNF774Q6NX45 483 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 LRRN1Q6UXK5 716 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 Q6ZT83 130 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 HIST2H3AQ71DI3 136 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 DCXRQ7Z4W1 244 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 MDP1Q86V88 176 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 UBE2J2Q8N2K1 259 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SLC22A24Q8N4F4 322 aa3.05□□□□□ -1.92
SCFD1-204ENST00000463622 SETD9Q8NE22 299 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms