RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 MARC2Q969Z3 335 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 CMBLQ96DG6 245 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 SLC6A15Q9H2J7 730 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 IFT46Q9NQC8 304 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 PLA2G3Q9NZ20 509 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 ABI3Q9P2A4 366 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 KCNK7Q9Y2U2 307 aa10.93□□□□□ -0.66
COL4A6-204ENST00000461897 A0A0J9YW62 118 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 LYL1P12980 280 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 WT1P19544 449 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-204ENST00000461897 PSMB6P28072 239 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 PABPC1L2AQ5JQF8 200 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 THEM4Q5T1C6 240 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 NSUN5P2Q63ZY6 315 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 INO80EQ8NBZ0 244 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-204ENST00000461897 SLC30A7Q8NEW0 376 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 BPIFCQ8NFQ6 507 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 OR10H5Q8NGA6 315 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 OR5AP2Q8NGF4 316 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 PIK3IP1Q96FE7 263 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 LRRC46Q96FV0 321 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 SEC22AQ96IW7 307 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 C1orf147Q96MC9 270 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-204ENST00000461897 OXGR1Q96P68 337 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 FAM173AQ9BQD7 235 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 CENPMQ9NSP4 180 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 MYEF2Q9P2K5 600 aaKnown RBP10.92□□□□□ -0.66
COL4A6-204ENST00000461897 MBD2Q9UBB5 411 aa10.92□□□□□ -0.66
COL4A6-204ENST00000461897 BOKQ9UMX3 212 aaPredicted RBP10.92□□□□□ -0.66
COL4A6-204ENST00000461897 LOC102725191A0A1B0GVB3 256 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 TNFSF11O14788 317 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 NKX2-8O15522 239 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 CSN2P05814 226 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 CCL1P22362 96 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 GDF1P27539 372 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 LAP3P28838 519 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 FAM189A2Q15884 450 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 HYAL4Q2M3T9 481 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 WIPI1Q5MNZ9 446 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-204ENST00000461897 OR52W1Q6IF63 320 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 GGNQ86UU5 652 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 NAA40Q86UY6 237 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 ARRDC1Q8N5I2 433 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 CHST4Q8NCG5 386 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 ADAD2Q8NCV1 583 aaKnown RBP10.91□□□□□ -0.66
COL4A6-204ENST00000461897 LPAR5Q9H1C0 372 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 ZNF703Q9H7S9 590 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-204ENST00000461897 PURGQ9UJV8 347 aaKnown RBP10.91□□□□□ -0.66
COL4A6-204ENST00000461897 GPR132Q9UNW8 380 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 MRPS18CQ9Y3D5 142 aaKnown RBP10.91□□□□□ -0.66
COL4A6-204ENST00000461897 A0A0A6YYD4 124 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 IGHV3-15A0A0B4J1V0 119 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 PGA4P0DJD7 388 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 PGA3P0DJD8 388 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 CD79AP11912 226 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 GNB3P16520 340 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 ZNF93P35789 620 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-204ENST00000461897 RFC3P40938 356 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 STK11Q15831 433 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 KCNMB1Q16558 191 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 SLC22A6Q4U2R8 563 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 TMEM128Q5BJH2 165 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 C10orf91Q5T1B1 145 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 PDSS1Q5T2R2 415 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 SULF2Q8IWU5 870 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 OR5AS1Q8N127 324 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 MDS2Q8NDY4 140 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 NOXO1Q8NFA2 376 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 TERB2Q8NHR7 220 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 SSC4DQ8WTU2 575 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 UCN2Q96RP3 112 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 SRXN1Q9BYN0 137 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 NKX6-2Q9C056 277 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-204ENST00000461897 SELENOIQ9C0D9 397 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 CHMP1AQ9HD42 196 aaPredicted RBP10.91□□□□□ -0.66
COL4A6-204ENST00000461897 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.91□□□□□ -0.66
COL4A6-204ENST00000461897 PCDHB10Q9UN67 800 aa10.91□□□□□ -0.66
COL4A6-204ENST00000461897 AKAP13Q12802 2813 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 ZNF878C9JN71 531 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 F5H0A9 414 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-204ENST00000461897 EIF1BO60739 113 aaKnown RBP10.9□□□□□ -0.66
COL4A6-204ENST00000461897 TRAPPC6AO75865 159 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 ATG12O94817 140 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 IFNA6P05013 189 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 ZNF43P17038 809 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 GNALP38405 381 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 GFRA1P56159 465 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 SOX8P57073 446 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 CSNK2A1P68400 391 aaPredicted RBP10.9□□□□□ -0.66
COL4A6-204ENST00000461897 LRRC37A5PQ49AS3 106 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 AWAT2Q6E213 333 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 ELP2Q6IA86 826 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 PGAP1Q75T13 922 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 PEG10Q86TG7 708 aaKnown RBP10.9□□□□□ -0.66
COL4A6-204ENST00000461897 ANGPTL5Q86XS5 388 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 IQCF2Q8IXL9 164 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 OR10Z1Q8NGY1 313 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 OR4K15Q8NH41 348 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 OR6X1Q8NH79 312 aa10.9□□□□□ -0.66
COL4A6-204ENST00000461897 KCNG3Q8TAE7 436 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms