RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 SLC25A35Q3KQZ1 300 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 C6orf99Q4VX62 202 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 FBXO48Q5FWF7 155 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 FAM222AQ5U5X8 452 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 AADACL4Q5VUY2 407 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 TMEM236Q5W0B7 351 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 PID1Q7Z2X4 250 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 NT5DC3Q86UY8 548 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 ASCC1Q8N9N2 400 aaKnown RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 OR4M2Q8NGB6 313 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 NT5CQ8TCD5 201 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 DOK4Q8TEW6 326 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 RXFP2Q8WXD0 754 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 DEDD2Q8WXF8 326 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 TFGQ92734 400 aaPredicted RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 ZNF717Q9BY31 904 aaPredicted RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 STMN4Q9H169 189 aaPredicted RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 ARV1Q9H2C2 271 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 CHMP4BQ9H444 224 aaKnown RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 VAPAQ9P0L0 249 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 ZMAT5Q9UDW3 170 aaKnown RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 NDRG2Q9UN36 371 aaKnown RBP1.8□□□□□ -2.12
HDAC6-212ENST00000461608 TFR2Q9UP52 801 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 AP3M1Q9Y2T2 418 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 S4R3C0 116 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 V9GYY9 64 aa1.8□□□□□ -2.12
HDAC6-212ENST00000461608 ANKRD20A5PA0PJZ0 165 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 A8MWL6 223 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 M0R1X1 148 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 PSMD11O00231 422 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 RFXANKO14593 260 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 SERPINB7O75635 380 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 IGLV3-25P01717 112 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 MAS1P04201 325 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 POLR2IP36954 125 aaKnown RBP1.79□□□□□ -2.12
HDAC6-212ENST00000461608 HTR2BP41595 481 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 MLF1P58340 268 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 MTPNP58546 118 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 DSTNP60981 165 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 RPL31P62899 125 aaKnown RBP1.79□□□□□ -2.12
HDAC6-212ENST00000461608 ADIGQ0VDE8 80 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 SYT6Q5T7P8 510 aaPredicted RBP1.79□□□□□ -2.12
HDAC6-212ENST00000461608 KHDRBS2Q5VWX1 349 aaKnown RBP1.79□□□□□ -2.12
HDAC6-212ENST00000461608 IGFL3Q6UXB1 125 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 CA13Q8N1Q1 262 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 SYS1Q8N2H4 156 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 SLC25A29Q8N8R3 303 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 APCDD1LQ8NCL9 501 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 OR5T1Q8NG75 326 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 OR5M1Q8NGP8 315 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 OR6K2Q8NGY2 324 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 OR8K3Q8NH51 312 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 OR51A7Q8NH64 312 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 ESR2Q92731 530 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 GHSRQ92847 366 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 Q96MT0 163 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 ALS2CR12Q96Q35 445 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 NUDT9Q9BW91 350 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 MAP1LC3CQ9BXW4 147 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 TBL1XR1Q9BZK7 514 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 SYT4Q9H2B2 425 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 ZSCAN16Q9H4T2 348 aaPredicted RBP1.79□□□□□ -2.12
HDAC6-212ENST00000461608 PLEKHF2Q9H8W4 249 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 FBXO8Q9NRD0 319 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 C21orf62Q9NYP8 219 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 RAB23Q9ULC3 237 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 ACOT9Q9Y305 439 aa1.79□□□□□ -2.12
HDAC6-212ENST00000461608 NUP214P35658 2090 aaPredicted RBP1.79□□□□□ -2.12
HDAC6-212ENST00000461608 IGLV2-18A0A075B6J9 118 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 IGKV1-27A0A075B6S5 117 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 IGHV6-1A0A0B4J1U7 121 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 TRAV8-6A0A0B4J262 113 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 C5orf63A6NC05 138 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 ZNF879B4DU55 563 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 BOLA2-SMG1P6H3BVE0 249 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 M0R1B8 84 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 RBBP9O75884 186 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 HTR2CP28335 458 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 MPIP34949 423 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 MPV17P39210 176 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 GPR4P46093 362 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 DNASE1L1P49184 302 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 BTN1A1Q13410 526 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 TAL2Q16559 108 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 LIN9Q5TKA1 542 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 HHATQ5VTY9 493 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 HMGN2P46Q86SG4 172 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 PDCL2Q8N4E4 241 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 OTUD6BQ8N6M0 293 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 SPERTQ8NA61 448 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 OR2Z1Q8NG97 314 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 OR51Q1Q8NH59 317 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 CIRBP-AS1Q8TBR5 109 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 LRRC20Q8TCA0 184 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 TMEM159Q96B96 161 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 RBMXL1Q96E39 390 aaKnown RBP1.78□□□□□ -2.12
HDAC6-212ENST00000461608 CFAP53Q96M91 514 aa1.78□□□□□ -2.12
HDAC6-212ENST00000461608 CDX2Q99626 313 aaPredicted RBP1.78□□□□□ -2.12
HDAC6-212ENST00000461608 NAPGQ99747 312 aaPredicted RBP1.78□□□□□ -2.12
HDAC6-212ENST00000461608 PDCD1LG2Q9BQ51 273 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms