RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 OR6X1Q8NH79 312 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 FGF11Q92914 225 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 IER2Q9BTL4 223 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 NARFLQ9H6Q4 476 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 CDH20Q9HBT6 801 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 SZT2Q5T011 3432 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 A0A1W2PQM1 296 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 TOX3O15405 576 aaPredicted RBP10.3□□□□□ -0.76
NPHP4-204ENST00000460696 PNLIPP16233 465 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 MST1P26927 711 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 STK11Q15831 433 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 C11orf87Q6NUJ2 197 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 CMTM1Q8IZ96 169 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 TMEM231Q9H6L2 316 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 LRRK1Q38SD2 2015 aa10.3□□□□□ -0.76
NPHP4-204ENST00000460696 A0A087WZY1 265 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 TRBV5-7A0A0A0MS05 114 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 ADAP1O75689 374 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 SERPINE2P07093 398 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 ROM1Q03395 351 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 PLAURQ03405 335 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 PLPPR5Q32ZL2 321 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 TMEM128Q5BJH2 165 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 HSD17B11Q8NBQ5 300 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 OR2M3Q8NG83 312 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 RNF141Q8WVD5 230 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF385AQ96PM9 386 aaKnown RBP10.29□□□□□ -0.76
NPHP4-204ENST00000460696 TIMM10BQ9Y5J6 103 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 MED13LQ71F56 2210 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF814B7Z6K7 855 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF587BE7ETH6 402 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 IFNA2P01563 188 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 EDN3P14138 238 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 GLRA1P23415 457 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 SP6Q3SY56 376 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 SLC25A26Q70HW3 274 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 BPHLQ86WA6 291 aaPredicted RBP10.29□□□□□ -0.76
NPHP4-204ENST00000460696 ARHGEF39Q8N4T4 335 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 OR9K2Q8NGE7 335 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF519Q8TB69 540 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 PSMF1Q92530 271 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 RRNAD1Q96FB5 475 aaKnown RBP10.29□□□□□ -0.76
NPHP4-204ENST00000460696 CXorf58Q96LI9 332 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 BCO1Q9HAY6 547 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF462Q96JM2 2506 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 CCDC168Q8NDH2 2452 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 IGKV3D-11A0A0A0MRZ8 115 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 NXPH3O95157 252 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF205O95201 554 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 IGLV3-19P01714 112 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF806P0C7X5 589 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 BTCP35070 178 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 SLC22A25Q6T423 547 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 SEZ6L2Q6UXD5 910 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 MARC2Q969Z3 335 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 TMPRSS13Q9BYE2 586 aa10.29□□□□□ -0.76
NPHP4-204ENST00000460696 C9orf170A2RU37 121 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 TOR1AO14656 332 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 CDC14BO60729 498 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 SLC34A2O95436 690 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF32P17041 273 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 CXCL2P19875 107 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 TBPP20226 339 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 DUSP1P28562 367 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 PPT1P50897 306 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF133P52736 654 aaPredicted RBP10.28□□□□□ -0.76
NPHP4-204ENST00000460696 FBXL14Q8N1E6 418 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 LRRC75AQ8NAA5 344 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 APCDD1LQ8NCL9 501 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 PP6455Q8WZ26 134 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 NINJ1Q92982 152 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 HGDQ93099 445 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 GPR137Q96N19 417 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF75AQ96N20 296 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 FOXB1Q99853 325 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 P4HTMQ9NXG6 502 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 ST3GAL6Q9Y274 331 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 ZNF175Q9Y473 711 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 CCDC187A0A096LP49 1063 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 IGKV1D-43A0A0B4J1Z2 117 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 C5orf49A4QMS7 147 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 LIMK1P53667 647 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 CAMK2BQ13554 666 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 CLINT1Q14677 625 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 CSRP2Q16527 193 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 LAMTOR1Q6IAA8 161 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 PLXDC2Q6UX71 529 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 ZBTB44Q8NCP5 570 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 TMEM104Q8NE00 496 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 LRRC46Q96FV0 321 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 ZC3H10Q96K80 434 aaKnown RBP10.28□□□□□ -0.76
NPHP4-204ENST00000460696 KCNK17Q96T54 332 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 PLA2G3Q9NZ20 509 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 IGF2P01344 180 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 NHLH1Q02575 133 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 FIP1L1Q6UN15 594 aaKnown RBP10.28□□□□□ -0.76
NPHP4-204ENST00000460696 ARRDC1Q8N5I2 433 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 EMG1Q92979 244 aaKnown RBP10.28□□□□□ -0.76
NPHP4-204ENST00000460696 SLAMF9Q96A28 289 aa10.28□□□□□ -0.76
NPHP4-204ENST00000460696 NPAS1Q99742 590 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms