RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 OR13C3Q8NGS6 347 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 DHDHQ9UQ10 334 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 APCP25054 2843 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 TRBV2A0A0J9YWF9 115 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 A8MXK9 166 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 F5H0A9 414 aaPredicted RBP9.02□□□□□ -0.97
UBR4-208ENST00000459947 H0YL77 283 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 RGS10O43665 173 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 CLIC3O95833 236 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 IGHV2-5P01817 119 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 IGHV4-31P0DP07 118 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 ACKR3P25106 362 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 MAB21L1Q13394 359 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 GPR50Q13585 617 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 RPS4Y2Q8TD47 263 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 SOX7Q9BT81 388 aa9.02□□□□□ -0.97
UBR4-208ENST00000459947 CREBBPQ92793 2442 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 DENRO43583 198 aaKnown RBP9.01□□□□□ -0.97
UBR4-208ENST00000459947 ATF1P18846 271 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 PSMB10P40306 273 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 MVKQ03426 396 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 ESCO2Q56NI9 601 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 YIF1BQ5BJH7 314 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 TEX36Q5VZQ5 186 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 CD276Q5ZPR3 534 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 PRSS35Q8N3Z0 413 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 TSEN15Q8WW01 171 aaKnown RBP9.01□□□□□ -0.97
UBR4-208ENST00000459947 BORCS8Q96FH0 119 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 SEBOXQ9HB31 216 aaPredicted RBP9.01□□□□□ -0.97
UBR4-208ENST00000459947 ZNF281Q9Y2X9 895 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 POLR3KQ9Y2Y1 108 aaPredicted RBP9.01□□□□□ -0.97
UBR4-208ENST00000459947 AKAP6Q13023 2319 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 OOEPA6NGQ2 149 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 A8MV72 311 aaPredicted RBP9.01□□□□□ -0.97
UBR4-208ENST00000459947 ZNF732B4DXR9 585 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 ECDO95905 644 aaPredicted RBP9.01□□□□□ -0.97
UBR4-208ENST00000459947 HLA-DPB1P04440 258 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 GRPP07492 148 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 FAHP16930 419 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 PSMA1P25786 263 aaKnown RBP9.01□□□□□ -0.97
UBR4-208ENST00000459947 RIPPLY3P57055 190 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 SMN1Q16637 294 aaKnown RBP9.01□□□□□ -0.97
UBR4-208ENST00000459947 ZNF404Q494X3 552 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 SLC36A1Q7Z2H8 476 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 MKXQ8IYA7 352 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 OR5D14Q8NGL3 314 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 OR5V1Q9UGF6 321 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 C5orf63A6NC05 138 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 LYNX1G3V0Z9 82 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 LYNX1P0DP58 116 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 PRAMEF6Q5VXH4 476 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 PRSS48Q7RTY5 328 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 MS4A15Q8N5U1 240 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 LRRC29Q8WV35 223 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 SMIM19Q96E16 107 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 ZNF649Q9BS31 505 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 FRRS1LQ9P0K9 344 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 CKLFQ9UBR5 152 aa9.01□□□□□ -0.97
UBR4-208ENST00000459947 LOC100289279A0A1B0GTE1 492 aa9□□□□□ -0.97
UBR4-208ENST00000459947 MAGEB3O15480 346 aa9□□□□□ -0.97
UBR4-208ENST00000459947 NOS1APO75052 506 aaPredicted RBP9□□□□□ -0.97
UBR4-208ENST00000459947 LY6G6DO95868 133 aa9□□□□□ -0.97
UBR4-208ENST00000459947 GNAO1P09471 354 aa9□□□□□ -0.97
UBR4-208ENST00000459947 ETV1P50549 477 aa9□□□□□ -0.97
UBR4-208ENST00000459947 SMIM21Q3B7S5 101 aa9□□□□□ -0.97
UBR4-208ENST00000459947 LURAP1LQ8IV03 231 aa9□□□□□ -0.97
UBR4-208ENST00000459947 NANOGP1Q8N7R0 232 aa9□□□□□ -0.97
UBR4-208ENST00000459947 DUSP21Q9H596 190 aa9□□□□□ -0.97
UBR4-208ENST00000459947 ZCCHC4Q9H5U6 513 aa9□□□□□ -0.97
UBR4-208ENST00000459947 PCDHB16Q9NRJ7 776 aa9□□□□□ -0.97
UBR4-208ENST00000459947 SRRM5B3KS81 715 aa9□□□□□ -0.97
UBR4-208ENST00000459947 RPS2P15880 293 aaKnown RBP9□□□□□ -0.97
UBR4-208ENST00000459947 ZNF154Q13106 437 aa9□□□□□ -0.97
UBR4-208ENST00000459947 MICBQ29980 383 aa9□□□□□ -0.97
UBR4-208ENST00000459947 SERPINA12Q8IW75 414 aa9□□□□□ -0.97
UBR4-208ENST00000459947 SAXO1Q8IYX7 474 aa9□□□□□ -0.97
UBR4-208ENST00000459947 PHYHIPQ92561 330 aa9□□□□□ -0.97
UBR4-208ENST00000459947 MED30Q96HR3 178 aa9□□□□□ -0.97
UBR4-208ENST00000459947 OR51I2Q9H344 312 aa9□□□□□ -0.97
UBR4-208ENST00000459947 YAE1D1Q9NRH1 226 aa9□□□□□ -0.97
UBR4-208ENST00000459947 UFSP2Q9NUQ7 469 aa9□□□□□ -0.97
UBR4-208ENST00000459947 KAAG1Q9UBP8 84 aa9□□□□□ -0.97
UBR4-208ENST00000459947 AASSQ9UDR5 926 aa9□□□□□ -0.97
UBR4-208ENST00000459947 DYSFO75923 2080 aa9□□□□□ -0.97
UBR4-208ENST00000459947 PQLC2LA1A4F0 135 aa9□□□□□ -0.97
UBR4-208ENST00000459947 MSMBP08118 114 aa9□□□□□ -0.97
UBR4-208ENST00000459947 LMO4P61968 165 aa9□□□□□ -0.97
UBR4-208ENST00000459947 PPP3R1P63098 170 aa9□□□□□ -0.97
UBR4-208ENST00000459947 AVPI1Q5T686 147 aa9□□□□□ -0.97
UBR4-208ENST00000459947 HPSE2Q8WWQ2 592 aa9□□□□□ -0.97
UBR4-208ENST00000459947 FCGR1BQ92637 280 aa9□□□□□ -0.97
UBR4-208ENST00000459947 GLS2Q9UI32 602 aa9□□□□□ -0.97
UBR4-208ENST00000459947 LMX1BO60663 402 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 MPZP25189 248 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 RBP2P50120 134 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 SLC35A2P78381 396 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 IL24Q13007 206 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 CDH26Q8IXH8 852 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 PARP16Q8N5Y8 322 aa8.99□□□□□ -0.97
UBR4-208ENST00000459947 ZSCAN4Q8NAM6 433 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms