RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 FCN3O75636 299 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 DHRS3O75911 302 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 PRTN3P24158 256 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 HTR1FP30939 366 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 COMPP49747 757 aaPredicted RBP17.58■□□□□ 0.4
HMGB3-205ENST00000455596 BPIFB3P59826 476 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 GMFBP60983 142 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 GNG3P63215 75 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 CEP78Q5JTW2 689 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 METTL11BQ5VVY1 283 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 DUX5Q96PT3 197 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 ENPP5Q9UJA9 477 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 PIGLQ9Y2B2 252 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 R4GMQ9 66 aa17.58■□□□□ 0.4
HMGB3-205ENST00000455596 ZNF732B4DXR9 585 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 AKR7A2O43488 359 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 NDUFB3O43676 98 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 SFTPBP07988 381 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 FAHP16930 419 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 ELF3P78545 371 aaPredicted RBP17.57■□□□□ 0.4
HMGB3-205ENST00000455596 BCL2L15Q5TBC7 163 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 STUMQ69YW2 141 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 BRD3OSQ6XYD6 125 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 PLEKHG7Q6ZR37 379 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 MOB3CQ70IA8 216 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 OR5T2Q8NGG2 359 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 OR5A2Q8NGI9 324 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 OR8J1Q8NGP2 316 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 WDFY2Q96P53 400 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 RAB3IPQ96QF0 476 aaPredicted RBP17.57■□□□□ 0.4
HMGB3-205ENST00000455596 TBX5Q99593 518 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 DNTTIP1Q9H147 329 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 WDR13Q9H1Z4 485 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 SNTG1Q9NSN8 517 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 MRM2Q9UI43 246 aaKnown RBP17.57■□□□□ 0.4
HMGB3-205ENST00000455596 OR52A1Q9UKL2 312 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 SNX5Q9Y5X3 404 aa17.57■□□□□ 0.4
HMGB3-205ENST00000455596 A0A1B0GW55 424 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 NKX6-3A6NJ46 265 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 OR5B21A6NL26 309 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 KRT8P05787 483 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 OR2T7P0C7T2 308 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 DUX4L2P0CJ85 424 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 DUX4L3P0CJ86 424 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 DUX4L4P0CJ87 422 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 DUX4L5P0CJ88 424 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 DUX4L6P0CJ89 424 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 DUX4L7P0CJ90 424 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 MMP9P14780 707 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 CDC42P60953 191 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 KPNB1Q14974 876 aaKnown RBP17.56■□□□□ 0.4
HMGB3-205ENST00000455596 ATPAF1Q5TC12 328 aaPredicted RBP17.56■□□□□ 0.4
HMGB3-205ENST00000455596 PLCXD3Q63HM9 321 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 ZFP1Q6P2D0 407 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 DUX4L9Q6RFH8 374 aaPredicted RBP17.56■□□□□ 0.4
HMGB3-205ENST00000455596 ELMOD2Q8IZ81 293 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 FAM216BQ8N7L0 139 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 YIPF7Q8N8F6 280 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 OR2T27Q8NH04 317 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 C1orf147Q96MC9 270 aaPredicted RBP17.56■□□□□ 0.4
HMGB3-205ENST00000455596 TBX15Q96SF7 602 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 OR51I2Q9H344 312 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 DUX4Q9UBX2 424 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 RPUSD1Q9UJJ7 312 aaKnown RBP17.56■□□□□ 0.4
HMGB3-205ENST00000455596 ORC6Q9Y5N6 252 aa17.56■□□□□ 0.4
HMGB3-205ENST00000455596 SOX21Q9Y651 276 aaPredicted RBP17.56■□□□□ 0.4
HMGB3-205ENST00000455596 GPR37O15354 613 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 NRASP01111 189 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 GLRA1P23415 457 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 CFPP27918 469 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 ATP6V1E1P36543 226 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 TGM4P49221 684 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 IKZF1Q13422 519 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 TMED1Q13445 227 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 PDCD1Q15116 288 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 LRRC10Q5BKY1 277 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 DMRTC1Q5HYR2 192 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 SSX6Q7RTT6 188 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 FGFRL1Q8N441 504 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 ZNF671Q8TAW3 534 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 RFKQ969G6 155 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 SLC25A28Q96A46 364 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 SIRPDQ9H106 197 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 CNTD2Q9H8S5 307 aa17.55■□□□□ 0.4
HMGB3-205ENST00000455596 A0A1W2PQL4 384 aaPredicted RBP17.54■□□□□ 0.4
HMGB3-205ENST00000455596 H3BNX3 289 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 RHBDL1O75783 438 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 RPP14O95059 124 aaKnown RBP17.54■□□□□ 0.4
HMGB3-205ENST00000455596 AMY2BP19961 511 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 ARF6P62330 175 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 ZNF684Q5T5D7 378 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 ZNF788Q6ZQV5 615 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 C3orf56Q8N813 242 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 OR10H4Q8NGA5 316 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 EME1Q96AY2 570 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 MED30Q96HR3 178 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 IMPAD1Q9NX62 359 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 NLKQ9UBE8 527 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 V9GYS6 101 aa17.54■□□□□ 0.4
HMGB3-205ENST00000455596 CENPVL3A0A0U1RRI6 287 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms