RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 ATF1P18846 271 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 GALP22466 123 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 GABRA5P31644 462 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 CFHR2P36980 270 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 LIPKQ5VXJ0 399 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 ZNF529Q6P280 563 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 ZNF573Q86YE8 665 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 PHC2Q8IXK0 858 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 C1orf87Q8N0U7 546 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 OR1M1Q8NGA1 313 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 FAM168AQ92567 244 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 TMEM106AQ96A25 262 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 GPR173Q9NS66 373 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 TMEM106BQ9NUM4 274 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 CKLFQ9UBR5 152 aa12.1□□□□□ -0.47
HMGXB4-204ENST00000455359 TRBV5-7A0A0A0MS05 114 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 LOC100289279A0A1B0GTE1 492 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 PNMA8CA0A1B0GUJ8 204 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 PQLC2LA1A4F0 135 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 ZNF879B4DU55 563 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 ZNF732B4DXR9 585 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 LY6HO94772 140 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 IRF2P14316 349 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 SLC25A16P16260 332 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 COL8A2P25067 703 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 THBS2P35442 1172 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 RIN1Q13671 783 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 UBE2V2Q15819 145 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 CEP78Q5JTW2 689 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 UNQ9370/PRO34162Q6UXP9 181 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 KCTD8Q6ZWB6 473 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 PEG10Q86TG7 708 aaKnown RBP12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 KRTAP1-3Q8IUG1 177 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 ZNF525Q8N782 197 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 C10orf105Q8TEF2 133 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 CCL17Q92583 94 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 DVL3Q92997 716 aaPredicted RBP12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 CPNE2Q96FN4 548 aaPredicted RBP12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 TIMD4Q96H15 378 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 PIMREGQ9BSJ6 248 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 OR51I2Q9H344 312 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 NDUFB11Q9NX14 153 aa12.09□□□□□ -0.47
HMGXB4-204ENST00000455359 MAP1AP78559 2803 aaPredicted RBP12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 CSMD2Q7Z408 3487 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 A6NIN4 97 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 CLDN25C9JDP6 229 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 H3BSH0 61 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 CCRL2O00421 344 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 SULT1B1O43704 296 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 LMX1BO60663 402 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 CDC14BO60729 498 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 SC5DO75845 299 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 OCMP0CE72 109 aaPredicted RBP12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 JUNBP17275 347 aaPredicted RBP12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 FSTP19883 344 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 RAB3AP20336 220 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 PSMB9P28065 219 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 SOX2P48431 317 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 PPP3R1P63098 170 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 ZNF154Q13106 437 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 ACSM3Q53FZ2 586 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 SPNS3Q6ZMD2 512 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 LHFPL2Q6ZUX7 228 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 MOGAT3Q86VF5 341 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 OR10Z1Q8NGY1 313 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 RAB1CQ92928 201 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 YIPF5Q969M3 257 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 BORCS8Q96FH0 119 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 OR14A2Q96R54 314 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 TMED9Q9BVK6 235 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 RNF7Q9UBF6 113 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 FOXJ3Q9UPW0 622 aa12.08□□□□□ -0.48
HMGXB4-204ENST00000455359 IGKV1-9A0A0C4DH69 117 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 MAGEA13PA6NCF6 341 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 TRIM64BA6NI03 449 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 A6NLC8 198 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 VWC2LB2RUY7 222 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 TMEM178BH3BS89 294 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 MAGEB3O15480 346 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 INMTO95050 263 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 ALDOBP05062 364 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 GRPP07492 148 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 ACAA1P09110 424 aaPredicted RBP12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 IGFBP3P17936 291 aaPredicted RBP12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 CPT2P23786 658 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 RBP2P50120 134 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 GPM6AP51674 278 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 ATP1B3P54709 279 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 MPPED2Q15777 294 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 CARTPTQ16568 116 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 SPRNQ5BIV9 151 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 PRAMEF6Q5VXH4 476 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 CD200R1LQ6Q8B3 271 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 WDR86Q86TI4 376 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 C11orf53Q8IXP5 236 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 OR13C9Q8NGT0 318 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 ZNF671Q8TAW3 534 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 MUL1Q969V5 352 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 DERL3Q96Q80 235 aa12.07□□□□□ -0.48
HMGXB4-204ENST00000455359 PKIBQ9C010 78 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms