RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 SHOX2O60902 331 aaPredicted RBP3.04□□□□□ -1.92
USP25-206ENST00000453553 NIPSNAP2O75323 286 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 RP2O75695 350 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 SLC25A14O95258 325 aaPredicted RBP3.04□□□□□ -1.92
USP25-206ENST00000453553 SLC25A27O95847 323 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 PCCAP05165 728 aaPredicted RBP3.04□□□□□ -1.92
USP25-206ENST00000453553 DTYMKP23919 212 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 CXCR1P25024 350 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 RPS9P46781 194 aaKnown RBP3.04□□□□□ -1.92
USP25-206ENST00000453553 LHX2P50458 406 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 CCR6P51684 374 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 PRKCDQ05655 676 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 PIGHQ14442 188 aaPredicted RBP3.04□□□□□ -1.92
USP25-206ENST00000453553 IRF4Q15306 451 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 ZNF658BQ4V348 819 aaPredicted RBP3.04□□□□□ -1.92
USP25-206ENST00000453553 CCDC122Q5T0U0 273 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 TMEM236Q5W0B7 351 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 FAM92BQ6ZTR7 304 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 PLCZ1Q86YW0 608 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 LGI3Q8N145 548 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 ZNF738Q8NE65 137 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 RORBQ92753 470 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 CDS1Q92903 461 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 TNFRSF14Q92956 283 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 PTX4Q96A99 478 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 TMEM159Q96B96 161 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 KCNS1Q96KK3 526 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 ZNF251Q9BRH9 671 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 SAMD10Q9BYL1 202 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 TOLLIPQ9H0E2 274 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 TFR2Q9UP52 801 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 SLC7A11Q9UPY5 501 aa3.04□□□□□ -1.92
USP25-206ENST00000453553 PUS1Q9Y606 427 aaKnown RBP eCLIP3.04□□□□□ -1.92
USP25-206ENST00000453553 ABCB11O95342 1321 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 IGKV1-27A0A075B6S5 117 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 TRAV8-6A0A0B4J262 113 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 IGHV5-51A0A0C4DH38 117 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 NKX2-6A6NCS4 301 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 C11orf94C9JXX5 98 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 TNFRSF11BO00300 401 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 ITGB1BP1O14713 200 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 CDIPTO14735 213 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 TRBV12-3P01733 135 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 HOXA9P31269 272 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 POLR2IP36954 125 aaKnown RBP3.03□□□□□ -1.92
USP25-206ENST00000453553 RPS10P46783 165 aaKnown RBP3.03□□□□□ -1.92
USP25-206ENST00000453553 TUFMP49411 452 aaKnown RBP3.03□□□□□ -1.92
USP25-206ENST00000453553 AQP5P55064 265 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 GFERP55789 205 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 RAP1AP62834 184 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 CRADDP78560 199 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 CDK5Q00535 292 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 RAB31Q13636 194 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 TRAM1Q15629 374 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 MPPED2Q15777 294 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 CDNFQ49AH0 187 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 C6orf99Q4VX62 202 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 OR10J3Q5JRS4 329 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 SYT6Q5T7P8 510 aaPredicted RBP3.03□□□□□ -1.92
USP25-206ENST00000453553 HBMQ6B0K9 141 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 TMEM205Q6UW68 189 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 GAPTQ8N292 157 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 OR13G1Q8NGZ3 307 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 OR1S1Q8NH92 325 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 OR2AE1Q8NHA4 323 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 SFXN5Q8TD22 340 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 RNASEH2CQ8TDP1 164 aaKnown RBP3.03□□□□□ -1.92
USP25-206ENST00000453553 GHSRQ92847 366 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 CCDC127Q96BQ5 260 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 SLC25A39Q9BZJ4 359 aaPredicted RBP3.03□□□□□ -1.92
USP25-206ENST00000453553 WDR55Q9H6Y2 383 aaPredicted RBP3.03□□□□□ -1.92
USP25-206ENST00000453553 HEBP1Q9NRV9 189 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 NLE1Q9NVX2 485 aaPredicted RBP3.03□□□□□ -1.92
USP25-206ENST00000453553 PPIL1Q9Y3C6 166 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 ORC6Q9Y5N6 252 aa3.03□□□□□ -1.92
USP25-206ENST00000453553 USP42Q9H9J4 1324 aaKnown RBP3.02□□□□□ -1.93
USP25-206ENST00000453553 ARHGAP21Q5T5U3 1957 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 A0A1B0GTI1 187 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 TMEM213A2RRL7 107 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 GOLGA8IPA6NC78 632 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 ZNF705GA8MUZ8 300 aaPredicted RBP3.02□□□□□ -1.93
USP25-206ENST00000453553 KRBOX1C9JBD0 128 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 MYL12BO14950 172 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 SERPINB7O75635 380 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 ADAP1O75689 374 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 SLC22A5O76082 557 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 IGKV1D-16P01601 117 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 MMP7P09237 267 aaPredicted RBP3.02□□□□□ -1.93
USP25-206ENST00000453553 OCMP0CE72 109 aaPredicted RBP3.02□□□□□ -1.93
USP25-206ENST00000453553 APLNRP35414 380 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 PLTPP55058 493 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 KRTAP10-8P60410 259 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 IFITM3Q01628 133 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 NAB1Q13506 487 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 TRIP13Q15645 432 aaPredicted RBP3.02□□□□□ -1.93
USP25-206ENST00000453553 TTC32Q5I0X7 151 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 RBM48Q5RL73 367 aaKnown RBP3.02□□□□□ -1.93
USP25-206ENST00000453553 HHATQ5VTY9 493 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 SSX7Q7RTT5 188 aa3.02□□□□□ -1.93
USP25-206ENST00000453553 PCP2Q8IVA1 136 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms