RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ZNF154Q13106 437 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 GPR50Q13585 617 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 CNN3Q15417 329 aaKnown RBP12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 UBE2V2Q15819 145 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 FAM76BQ5HYJ3 339 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 DMRTC1Q5HYR2 192 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 UTS2BQ765I0 119 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 HPSE2Q8WWQ2 592 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 CHST5Q9GZS9 411 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 PLCE1Q9P212 2302 aa12.32□□□□□ -0.44
NCKIPSD-207ENST00000453349 ITPR2Q14571 2701 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 CSMD2Q7Z408 3487 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 PPIAL4EA0A075B759 164 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 FAM230AA0A1W2PPH8 454 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 LRP5LA4QPB2 252 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 PPIAL4DF5H284 164 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 CDIPTO14735 213 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 SMAD7O15105 426 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 PPIAL4FP0DN26 164 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 ATF1P18846 271 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 PRKACBP22694 351 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 SOX2P48431 317 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 FUT6P51993 359 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 EMX1Q04741 257 aaPredicted RBP12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 LOXL1Q08397 574 aaPredicted RBP12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 TBCEQ15813 527 aaPredicted RBP12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 AVPI1Q5T686 147 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 WDR86Q86TI4 376 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 ZNF573Q86YE8 665 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 PARP16Q8N5Y8 322 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 SCCPDHQ8NBX0 429 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 ZNF671Q8TAW3 534 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 TRMT10AQ8TBZ6 339 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 UFD1Q92890 307 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 RPL3LQ92901 407 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 BORCS8Q96FH0 119 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 C18orf12Q96KH6 178 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 PGLYRP3Q96LB9 341 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 MGLLQ99685 303 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 OR51I2Q9H344 312 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 ZCCHC4Q9H5U6 513 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 ACOT13Q9NPJ3 140 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 WIPI2Q9Y4P8 454 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 PPIAL4AQ9Y536 164 aa12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 ANKRD17O75179 2603 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-207ENST00000453349 PQLC2LA1A4F0 135 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 ISPDA4D126 451 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 HEXAP06865 529 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 FOSL1P15407 271 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 ATP1B3P54709 279 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 BTG1P62324 171 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 MLLT11Q13015 90 aaPredicted RBP12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 Q499Y3 187 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 KCTD21Q4G0X4 260 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 ZNF826PQ6ZT77 177 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 ZNF367Q7RTV3 350 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 C11orf53Q8IXP5 236 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 SPARTQ8N0X7 666 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 CIARTQ8N365 385 aaPredicted RBP12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 MS4A15Q8N5U1 240 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 BOLLQ8N9W6 283 aaKnown RBP12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 DNAAF1Q8NEP3 725 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 NPRL2Q8WTW4 380 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 RGP1Q92546 391 aaPredicted RBP12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 THRSPQ92748 146 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 TMEM106AQ96A25 262 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 TMUB1Q9BVT8 246 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 FGF23Q9GZV9 251 aaPredicted RBP12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 TLNRD1Q9H1K6 362 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 DCAF16Q9NXF7 216 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 LRCH1Q9Y2L9 728 aa12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 SETXQ7Z333 2677 aaKnown RBP12.3□□□□□ -0.44
NCKIPSD-207ENST00000453349 TRBV5-5A0A0J9YX44 114 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 MAGEB3O15480 346 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 TNFAIP8O95379 198 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 IGHV2-70P01814 119 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 CFHR2P36980 270 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 RBMXP38159 391 aaKnown RBP12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 HAAOP46952 286 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 RBP2P50120 134 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 TPBGQ13641 420 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 ZNF773Q6PK81 442 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 WDR82Q6UXN9 313 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 LRRC28Q86X40 367 aaPredicted RBP12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 MUC20Q8N307 709 aaPredicted RBP12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 MAPK1IP1LQ8NDC0 245 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 OR10Z1Q8NGY1 313 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 LRRC29Q8WV35 223 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 FCGR1BQ92637 280 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 SPSB1Q96BD6 273 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 NARFLQ9H6Q4 476 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 PCDHB10Q9UN67 800 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 ABCA12Q86UK0 2595 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 DYSFO75923 2080 aa12.29□□□□□ -0.44
NCKIPSD-207ENST00000453349 CHD3Q12873 2000 aaKnown RBP12.28□□□□□ -0.44
NCKIPSD-207ENST00000453349 IGHV4-61A0A0C4DH41 118 aa12.28□□□□□ -0.44
NCKIPSD-207ENST00000453349 ZNF879B4DU55 563 aa12.28□□□□□ -0.44
NCKIPSD-207ENST00000453349 SULT1B1O43704 296 aa12.28□□□□□ -0.44
NCKIPSD-207ENST00000453349 ALX3O95076 343 aa12.28□□□□□ -0.44
NCKIPSD-207ENST00000453349 FSTL3O95633 263 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms