RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	HPSE2	Q8WWQ2	592 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	H1FX	Q92522	213 aa	Known RBP	7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	LHX4	Q969G2	390 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	UTP4	Q969X6	686 aa	Known RBP	7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	PPP1R14A	Q96A00	147 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	WDFY2	Q96P53	400 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	IL4I1	Q96RQ9	567 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	TBX15	Q96SF7	602 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	CNN2	Q99439	309 aa	Known RBP	7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	PRRG3	Q9BZD7	231 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	FGF23	Q9GZV9	251 aa	Predicted RBP	7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	PBOV1	Q9GZY1	135 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	WDR13	Q9H1Z4	485 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	RGCC	Q9H4X1	137 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	RNPEPL1	Q9HAU8	725 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	COPS3	Q9UNS2	423 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	MPC1	Q9Y5U8	109 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	PKD1L1	Q8TDX9	2849 aa		7.18	□□□□□ -1.26
RFX3-209	ENST00000451859	CMYA5	Q8N3K9	4069 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	CENPVL3	A0A0U1RRI6	287 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859		A0A1W2PRD5	423 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859		A0A1W2PRF3	423 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859		A0A1W2PRM7	423 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	NKX6-3	A6NJ46	265 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	ZNF879	B4DU55	563 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859		G3V2T6	193 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859		H3BSH0	61 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	TNFRSF13B	O14836	293 aa	Predicted RBP	7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	NDUFA2	O43678	99 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	APOL3	O95236	402 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	HKR1	P10072	659 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	MUC1	P15941	1255 aa	Predicted RBP	7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	FAH	P16930	419 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	GABRA2	P47869	451 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	RIDA	P52758	137 aa	Known RBP	7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	DLX1	P56177	255 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	CXCR4	P61073	352 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	MFGE8	Q08431	387 aa	Predicted RBP	7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	FOXL1	Q12952	345 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	BNIP1	Q12981	228 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	ATP6AP1	Q15904	470 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	SNCB	Q16143	134 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	TEX36	Q5VZQ5	186 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	PLCXD3	Q63HM9	321 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	MOB3C	Q70IA8	216 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	RHOU	Q7L0Q8	258 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	SLC36A1	Q7Z2H8	476 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	THAP5	Q7Z6K1	395 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	SLC35F2	Q8IXU6	374 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	BATF2	Q8N1L9	274 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	GALNT4	Q8N4A0	578 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	SCCPDH	Q8NBX0	429 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	OR51E1	Q8TCB6	317 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	DNAJC9	Q8WXX5	260 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	LRTOMT	Q8WZ04	291 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	OR5P3	Q8WZ94	311 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	NRBF2	Q96F24	287 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	HIST1H2AA	Q96QV6	131 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	TBX5	Q99593	518 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	TEAD3	Q99594	435 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	APOL4	Q9BPW4	351 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	MRO	Q9BYG7	248 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	KRTAP4-9	Q9BYQ8	210 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	YIPF3	Q9GZM5	350 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	SIRPD	Q9H106	197 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	SEMA6A	Q9H2E6	1030 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	ZMAT3	Q9HA38	289 aa	Known RBP	7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	GPR84	Q9NQS5	396 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	FAM206A	Q9NX38	181 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	H2AFY2	Q9P0M6	372 aa	Predicted RBP	7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	RPUSD1	Q9UJJ7	312 aa	Known RBP	7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	ZNF391	Q9UJN7	358 aa		7.17	□□□□□ -1.26
RFX3-209	ENST00000451859	KIAA2026	Q5HYC2	2103 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	ZNF816-ZNF321P	A0A0X1KG74	233 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859		A6NIN4	97 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	SAC3D1	A6NKF1	404 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	TMEM210	A6NLX4	147 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	SRRM5	B3KS81	715 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	ZNF732	B4DXR9	585 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	LOC110117498-PIK3R3	F6TDL0	507 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	P2RY10	O00398	339 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	NDUFB3	O43676	98 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	RHBDL1	O75783	438 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	RPP14	O95059	124 aa	Known RBP	7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	CST4	P01036	141 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	LIPF	P07098	398 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	MMP9	P14780	707 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	NDUFB7	P17568	137 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	MDK	P21741	143 aa	Predicted RBP	7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	GLRA1	P23415	457 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	FAS	P25445	335 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	ESRRG	P62508	458 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	ODF4	Q2M2E3	257 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	ZNF829	Q3KNS6	432 aa	Predicted RBP	7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	BCL2L15	Q5TBC7	163 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	SLX4IP	Q5VYV7	408 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	STUM	Q69YW2	141 aa		7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	HAGHL	Q6PII5	290 aa	Predicted RBP	7.16	□□□□□ -1.26
RFX3-209	ENST00000451859	ZNF322	Q6U7Q0	402 aa	Predicted RBP	7.16	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms