RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 C1orf109Q9NX04 203 aa3.16□□□□□ -1.9
HMGB1P48-201ENST00000446155 TMEM9Q9P0T7 183 aa3.16□□□□□ -1.9
HMGB1P48-201ENST00000446155 AP3M1Q9Y2T2 418 aa3.16□□□□□ -1.9
HMGB1P48-201ENST00000446155 CBY1Q9Y3M2 126 aa3.16□□□□□ -1.9
HMGB1P48-201ENST00000446155 ABCC5O15440 1437 aa3.16□□□□□ -1.9
HMGB1P48-201ENST00000446155 RAD50Q92878 1312 aa3.16□□□□□ -1.9
HMGB1P48-201ENST00000446155 PCDH11XQ9BZA7 1347 aa3.16□□□□□ -1.9
HMGB1P48-201ENST00000446155 PXDNQ92626 1479 aa3.16□□□□□ -1.9
HMGB1P48-201ENST00000446155 LAMC1P11047 1609 aa3.15□□□□□ -1.9
HMGB1P48-201ENST00000446155 IGHV3OR16-9A0A0B4J2B5 98 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 FAM240AA0A1B0GVK7 77 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 GOLGA6L10A6NI86 522 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 TOX3O15405 576 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 ADAP1O75689 374 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 MMP23AO75900 390 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 MYO1DO94832 1006 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 SUPT7LO94864 414 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 MOSP00540 346 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 CD8AP01732 235 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 FABP3P05413 133 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 HSPD1P10809 573 aaKnown RBP3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZNF30P17039 623 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 FUT3P21217 361 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 GABRR1P24046 479 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 CCNE1P24864 410 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 CDKN2BP42772 138 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 CDC34P49427 236 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 P2RX1P51575 399 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 BLVRAP53004 296 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR12D2P58182 307 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 CACNG7P62955 275 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR1Q1Q15612 314 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZNF630Q2M218 657 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 CCDC14Q49A88 953 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 TFDP3Q5H9I0 405 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 THOC7Q6I9Y2 204 aaKnown RBP3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 Q6ZT83 130 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZNF584Q8IVC4 421 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 C14orf178Q8N769 122 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 OR11H7Q8NGC8 314 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZFAND1Q8TCF1 268 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 PHF10Q8WUB8 498 aaKnown RBP3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 ING5Q8WYH8 240 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 DCUN1D5Q9BTE7 237 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 PRORYQ9H606 182 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZNF442Q9H7R0 627 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 EDA2RQ9HAV5 297 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 MED4Q9NPJ6 270 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 TREX1Q9NSU2 369 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 NLE1Q9NVX2 485 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 VNN3Q9NY84 501 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 UVRAGQ9P2Y5 699 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 PCYOX1Q9UHG3 505 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 RAB23Q9ULC3 237 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 TRAPPC4Q9Y296 219 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 SNX24Q9Y343 169 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 WIF1Q9Y5W5 379 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 KIF25-AS1Q9Y6Z4 181 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 ADGRB2O60241 1585 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 RGPD1P0DJD0 1748 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 NFASCO94856 1347 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 ABCB11O95342 1321 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 ADGRL2O95490 1459 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 TMEM131LA2VDJ0 1609 aa3.15□□□□□ -1.91
HMGB1P48-201ENST00000446155 MYOM1P52179 1685 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 BRD4O60885 1362 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 CDC42BPAQ5VT25 1732 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 LINC01619G3V211 115 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 CDIPTO14735 213 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 LIN7AO14910 233 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 SHOX2O60902 331 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 UPK1BO75841 260 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 KLF8O95600 359 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 PTHP01270 115 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 CD3GP09693 182 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 SLC35G6P0C7Q6 338 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 ZDHHC11BP0C7U3 371 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 PET100P0DJ07 73 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 RAB3AP20336 220 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 GGT2P36268 569 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 NDUFA8P51970 172 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 TIMM10P62072 90 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 PITPNAQ00169 270 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 HMGCS1Q01581 520 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 PRKCDQ05655 676 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 SMARCB1Q12824 385 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 ITGB3BPQ13352 177 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 DMC1Q14565 340 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 KIR2DS1Q14954 304 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 RGNQ15493 299 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 CLEC18BQ6UXF7 455 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 FBXW12Q6X9E4 464 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 MRPL52Q86TS9 123 aaKnown RBP3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 FUNDC1Q8IVP5 155 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 C11orf42Q8N5U0 333 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 GPR26Q8NDV2 337 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 NPBQ8NG41 125 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 UBA3Q8TBC4 463 aa3.14□□□□□ -1.91
HMGB1P48-201ENST00000446155 SFXN5Q8TD22 340 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms