RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-208	ENST00000443203	CELF2-AS1	Q8N7Q2	184 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	OR5A2	Q8NGI9	324 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	RGP1	Q92546	391 aa	Predicted RBP	11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	MUL1	Q969V5	352 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	TMEM106A	Q96A25	262 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	ADAT3	Q96EY9	351 aa	Predicted RBP	11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	RNF170	Q96K19	258 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	OR2V2	Q96R30	315 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	MDFI	Q99750	246 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	GSX2	Q9BZM3	304 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	ZCCHC4	Q9H5U6	513 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	CKLF	Q9UBR5	152 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	ROS1	P08922	2347 aa		11.97	□□□□□ -0.49
NELFA-208	ENST00000443203	TRIM64C	A6NLI5	447 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	TMEM210	A6NLX4	147 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	JUNB	P17275	347 aa	Predicted RBP	11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	ATF1	P18846	271 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	GABRA5	P31644	462 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	RPS11	P62280	158 aa	Known RBP eCLIP	11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	GNG3	P63215	75 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	ACSM3	Q53FZ2	586 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	PRIMA1	Q86XR5	153 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	OR13C5	Q8NGS8	318 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	UBASH3B	Q8TF42	649 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	ITLN1	Q8WWA0	313 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	OR5P3	Q8WZ94	311 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	PHYHIP	Q92561	330 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	RDH5	Q92781	318 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	DVL3	Q92997	716 aa	Predicted RBP	11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	TMEM203	Q969S6	136 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	ERGIC1	Q969X5	290 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	ITPKC	Q96DU7	683 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	PERP	Q96FX8	193 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	MEGF10	Q96KG7	1140 aa		11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	MYOZ1	Q9NP98	299 aa	Predicted RBP	11.96	□□□□□ -0.49
NELFA-208	ENST00000443203	DSCAM	O60469	2012 aa		11.96	□□□□□ -0.5
NELFA-208	ENST00000443203	PLCE1	Q9P212	2302 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	OR5B21	A6NL26	309 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	ZNF732	B4DXR9	585 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	SMAD7	O15105	426 aa	Known RBP	11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	MAGEB3	O15480	346 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	RGS9	O75916	674 aa	Predicted RBP	11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	HPX	P02790	462 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	GRP	P07492	148 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	DAO	P14920	347 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	RAB3A	P20336	220 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	PRKACB	P22694	351 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	FUT6	P51993	359 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	RPS25	P62851	125 aa	Known RBP	11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	PPP3R1	P63098	170 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	MRPS11	P82912	194 aa	Known RBP	11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	CEACAM19	Q7Z692	300 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	CIART	Q8N365	385 aa	Predicted RBP	11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	SPSB1	Q96BD6	273 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	BORCS8	Q96FH0	119 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	OR14A2	Q96R54	314 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	NDUFB11	Q9NX14	153 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203	CSPG4	Q6UVK1	2322 aa		11.95	□□□□□ -0.5
NELFA-208	ENST00000443203		A0A1W2PPK0	400 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203		A6NLC8	198 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	LRRC30	A6NM36	301 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	IFNL4	K9M1U5	179 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	SSX4	O60224	188 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	CDC14B	O60729	498 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	ALX3	O95076	343 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	IGHV4-39	P01824	125 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	SMIM18	P0DKX4	95 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	IRF2	P14316	349 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	TGFBR2	P37173	567 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	CRYBB2	P43320	205 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	GATA4	P43694	442 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	ATP1B3	P54709	279 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	MAB21L1	Q13394	359 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	UBE2V2	Q15819	145 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	SSX1	Q16384	188 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	HFE	Q30201	348 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	UNQ9370/PRO34162	Q6UXP9	181 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	ZNF573	Q86YE8	665 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	OR1M1	Q8NGA1	313 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	OR13C9	Q8NGT0	318 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	OR11L1	Q8NGX0	322 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	CPNE2	Q96FN4	548 aa	Predicted RBP	11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	DERL3	Q96Q80	235 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	SLITRK2	Q9H156	845 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	PPP1R3E	Q9H7J1	279 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	FN3KRP	Q9HA64	309 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	SCOC	Q9UIL1	159 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	FOXJ3	Q9UPW0	622 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	PPP1R3C	Q9UQK1	317 aa		11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	SF3B6	Q9Y3B4	125 aa	Known RBP	11.94	□□□□□ -0.5
NELFA-208	ENST00000443203	ARID1A	O14497	2285 aa		11.93	□□□□□ -0.5
NELFA-208	ENST00000443203	TRBV5-7	A0A0A0MS05	114 aa		11.93	□□□□□ -0.5
NELFA-208	ENST00000443203	IGHV1-69-2	A0A0G2JMI3	117 aa		11.93	□□□□□ -0.5
NELFA-208	ENST00000443203	TRDV1	A0A1B0GX56	115 aa		11.93	□□□□□ -0.5
NELFA-208	ENST00000443203	FAM230A	A0A1W2PPH8	454 aa		11.93	□□□□□ -0.5
NELFA-208	ENST00000443203	SULT1B1	O43704	296 aa		11.93	□□□□□ -0.5
NELFA-208	ENST00000443203	NDUFS7	O75251	213 aa		11.93	□□□□□ -0.5
NELFA-208	ENST00000443203	GPX5	O75715	221 aa		11.93	□□□□□ -0.5
NELFA-208	ENST00000443203	ARL6IP5	O75915	188 aa		11.93	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms