RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 ACKR3P25106 362 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 ERVFRD-1P60508 538 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 BLCAPP62952 87 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 COL10A1Q03692 680 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 TCTEX1D4Q5JR98 221 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 LDLRAD2Q5SZI1 272 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 TMEM200BQ69YZ2 307 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 KRT74Q7RTS7 529 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 TMEM219Q86XT9 240 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 FAM185AQ8N0U4 392 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 ZNF511Q8NB15 262 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 OR52H1Q8NGJ2 320 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 OR51L1Q8NGJ5 315 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 HPSE2Q8WWQ2 592 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 SP140LQ9H930 580 aa11.58□□□□□ -0.56
HMGN1-208ENST00000443046 ZNF850A8MQ14 1090 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 ANXA2P07355 339 aaKnown RBP11.57□□□□□ -0.56
HMGN1-208ENST00000443046 SPARCP09486 303 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 NCK1P16333 377 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 GLRA1P23415 457 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 SLC15A1P46059 708 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 GABRA2P47869 451 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 DYNLT3P51808 116 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 SLC25A1P53007 311 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 LGALS4P56470 323 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 PRDX4Q13162 271 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 SNCBQ16143 134 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 FTMTQ8N4E7 242 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 FAM86B1Q8N7N1 296 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 TMEM185AQ8NFB2 350 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 OR5AU1Q8NGC0 362 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 RNF133Q8WVZ7 376 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 FAM162AQ96A26 154 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 MALSU1Q96EH3 234 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 OR5M11Q96RB7 305 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 HOPXQ9BPY8 73 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-208ENST00000443046 NMNAT2Q9BZQ4 307 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 MUC13Q9H3R2 512 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 RGCCQ9H4X1 137 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 ABCB9Q9NP78 766 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 INPP5EQ9NRR6 644 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 DCAF13Q9NV06 445 aaKnown RBP11.57□□□□□ -0.56
HMGN1-208ENST00000443046 PITPNC1Q9UKF7 332 aa11.57□□□□□ -0.56
HMGN1-208ENST00000443046 HUWE1Q7Z6Z7 4374 aaKnown RBP11.57□□□□□ -0.56
HMGN1-208ENST00000443046 DNAH1Q9P2D7 4330 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 A0A1W2PRX2 142 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 ODF3BA8MYP8 253 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 PEX14O75381 377 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 MTRF1O75570 445 aaKnown RBP11.56□□□□□ -0.56
HMGN1-208ENST00000443046 APOC1P02654 83 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 SEMG1P04279 462 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 FMO3P31513 532 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 VDAC2P45880 294 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-208ENST00000443046 ZNF121P58317 390 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-208ENST00000443046 RPL31P62899 125 aaKnown RBP11.56□□□□□ -0.56
HMGN1-208ENST00000443046 TSPAN31Q12999 210 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 TMEM95Q3KNT9 176 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 FAM57BQ71RH2 274 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 SLC37A3Q8NCC5 494 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 RPS4Y2Q8TD47 263 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 RNF170Q96K19 258 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 OR10A2Q9H208 303 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 OR51I2Q9H344 312 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 EGLN3Q9H6Z9 239 aa11.56□□□□□ -0.56
HMGN1-208ENST00000443046 TBL2Q9Y4P3 447 aaKnown RBP11.56□□□□□ -0.56
HMGN1-208ENST00000443046 A0A1W2PPH5 198 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 SLC22A2O15244 555 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 SYNGR1O43759 233 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 GADD45GO95257 159 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 PF4V1P10720 104 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 COX7A1P24310 79 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 DLX6P56179 175 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 SMIM11AP58511 58 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 KRT72Q14CN4 511 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 PLA1AQ53H76 456 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 LINC01590Q5TEZ4 76 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 CPLX4Q7Z7G2 160 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 CALHM1Q8IU99 346 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 CD177Q8N6Q3 437 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 RP9Q8TA86 221 aaKnown RBP11.55□□□□□ -0.56
HMGN1-208ENST00000443046 FOXRED1Q96CU9 486 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-208ENST00000443046 YY1AP1Q9H869 796 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 USE1Q9NZ43 259 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 TSSC4Q9Y5U2 329 aaPredicted RBP11.55□□□□□ -0.56
HMGN1-208ENST00000443046 CDH10Q9Y6N8 788 aa11.55□□□□□ -0.56
HMGN1-208ENST00000443046 hCG_1809904A0A1W2PP81 198 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 A0A1W2PPE2 198 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 A0A1W2PR64 198 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 A0A1W2PRV1 198 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 C17orf98A8MV24 154 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 FAM90A22PA8MWA6 464 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 E9PQ18 207 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 ALDOBP05062 364 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 GYPBP06028 91 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 CCL3L1P16619 93 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 HSD11B1P28845 292 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 HOXD3P31249 432 aaPredicted RBP11.54□□□□□ -0.56
HMGN1-208ENST00000443046 OPRL1P41146 370 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 ZNF273Q14593 569 aa11.54□□□□□ -0.56
HMGN1-208ENST00000443046 GFOD2Q3B7J2 385 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms