RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 PNMA8CA0A1B0GUJ8 204 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 ANXA2P2A6NMY6 339 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 ZNF732B4DXR9 585 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 RGS10O43665 173 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 INHBBP09529 407 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 MAP2K4P45985 399 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 SLC3A1Q07837 685 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 ZMYND11Q15326 602 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 ZNF181Q2M3W8 571 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 C19orf18Q8NEA5 215 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 CCDC54Q8NEL0 328 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 OR13C3Q8NGS6 347 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 OR13C5Q8NGS8 318 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 CLDND2Q8NHS1 167 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 RPL3LQ92901 407 aaKnown RBP13.47□□□□□ -0.25
USP39-205ENST00000442708 SMIM19Q96E16 107 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 PGLYRP3Q96LB9 341 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 MICU1Q9BPX6 476 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 GSX1Q9H4S2 264 aaPredicted RBP13.47□□□□□ -0.25
USP39-205ENST00000442708 FN3KRPQ9HA64 309 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 ABCB9Q9NP78 766 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 NPTNQ9Y639 398 aa13.47□□□□□ -0.25
USP39-205ENST00000442708 IGKV1-9A0A0C4DH69 117 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 PQLC2LA1A4F0 135 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 ANKRD61A6NGH8 418 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 A6NLC8 198 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 FOSL1P15407 271 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 EGR1P18146 543 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 CDH15P55291 814 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 LMO4P61968 165 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 MZT1Q08AG7 82 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 KCTD8Q6ZWB6 473 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 PRSS48Q7RTY5 328 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 SCCPDHQ8NBX0 429 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 OR5A2Q8NGI9 324 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 NPRL2Q8WTW4 380 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 GHSRQ92847 366 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 RAB1CQ92928 201 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 ERGIC1Q969X5 290 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 HIST1H2AAQ96QV6 131 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 MND1Q9BWT6 205 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 CHST5Q9GZS9 411 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 CCDC90BQ9GZT6 254 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 COMMD4Q9H0A8 199 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 OR51I2Q9H344 312 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 PLEKHA1Q9HB21 404 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 TRIM36Q9NQ86 728 aa13.46□□□□□ -0.25
USP39-205ENST00000442708 IGKV1-27A0A075B6S5 117 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 TMEM210A6NLX4 147 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 IFNL4K9M1U5 179 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 CDIPTO14735 213 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 RHBDL1O75783 438 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 IGHV4-31P0DP07 118 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 ZNF12P17014 697 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 RPS11P62280 158 aaKnown RBP eCLIP13.45□□□□□ -0.26
USP39-205ENST00000442708 BTG1P62324 171 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 SPHARQ15513 63 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 TMEM249Q2WGJ8 235 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 ASPHD2Q6ICH7 369 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 WDR82Q6UXN9 313 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 RNF144BQ7Z419 303 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 LRRC28Q86X40 367 aaPredicted RBP13.45□□□□□ -0.26
USP39-205ENST00000442708 GCSAMQ8N6F7 178 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 TRMT10AQ8TBZ6 339 aaKnown RBP13.45□□□□□ -0.26
USP39-205ENST00000442708 C10orf35Q96D05 121 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 TIMD4Q96H15 378 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 RNF7Q9UBF6 113 aa13.45□□□□□ -0.26
USP39-205ENST00000442708 SETD2Q9BYW2 2564 aaPredicted RBP13.44□□□□□ -0.26
USP39-205ENST00000442708 ISPDA4D126 451 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 OR5B21A6NL26 309 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.44□□□□□ -0.26
USP39-205ENST00000442708 PLPP2O43688 288 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 LY6G6DO95868 133 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 LHBP01229 141 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 ZNF20P17024 532 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 EEF1B2P24534 225 aaKnown RBP13.44□□□□□ -0.26
USP39-205ENST00000442708 CD80P33681 288 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 SOX2P48431 317 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 CHN2P52757 468 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 GABARAPL2P60520 117 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 GNG3P63215 75 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 ACSM1Q08AH1 577 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 BOLLQ8N9W6 283 aaKnown RBP13.44□□□□□ -0.26
USP39-205ENST00000442708 OR11L1Q8NGX0 322 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 PP6455Q8WZ26 134 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 SEH1LQ96EE3 360 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 TMEM165Q9HC07 324 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 ZNF281Q9Y2X9 895 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 LRRC42Q9Y546 428 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 ABCA1O95477 2261 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 TLN2Q9Y4G6 2542 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 CSPG4Q6UVK1 2322 aa13.44□□□□□ -0.26
USP39-205ENST00000442708 TRBV5-5A0A0J9YX44 114 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 FAM230AA0A1W2PPH8 454 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 hCG_1807616A0A1W2PRN6 198 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 LRRC30A6NM36 301 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 CELP19835 753 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 CFHR2P36980 270 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 TAS2R43P59537 309 aa13.43□□□□□ -0.26
USP39-205ENST00000442708 BDH1Q02338 343 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms