RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 C1orf21Q9H246 121 aa9.7□□□□□ -0.86
TTC28-203ENST00000442232 SNTG1Q9NSN8 517 aa9.7□□□□□ -0.86
TTC28-203ENST00000442232 ZNF319Q9P2F9 582 aa9.7□□□□□ -0.86
TTC28-203ENST00000442232 NLKQ9UBE8 527 aa9.7□□□□□ -0.86
TTC28-203ENST00000442232 DUX4Q9UBX2 424 aa9.7□□□□□ -0.86
TTC28-203ENST00000442232 TMEM14AQ9Y6G1 99 aa9.7□□□□□ -0.86
TTC28-203ENST00000442232 ACOD1A6NK06 481 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.69□□□□□ -0.86
TTC28-203ENST00000442232 NPFFO15130 113 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 GSC2O15499 205 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 ACKR3P25106 362 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 GABRA2P47869 451 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 CAPZA1P52907 286 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 GNG3P63215 75 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 ELF3P78545 371 aaPredicted RBP9.69□□□□□ -0.86
TTC28-203ENST00000442232 CBX1P83916 185 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 RELBQ01201 579 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 APOFQ13790 326 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 SNAPC1Q16533 368 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 ZNF829Q3KNS6 432 aaPredicted RBP9.69□□□□□ -0.86
TTC28-203ENST00000442232 DNAL1Q4LDG9 190 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 MIDNQ504T8 468 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 PLCXD3Q63HM9 321 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 FGFRL1Q8N441 504 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 TMEM185AQ8NFB2 350 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 ZNF671Q8TAW3 534 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 CANT1Q8WVQ1 401 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 ITFG2Q969R8 447 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 GAFA1Q96PS6 74 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 CITED1Q99966 193 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 WDR13Q9H1Z4 485 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 PPP1R3EQ9H7J1 279 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 SLC25A19Q9HC21 320 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 TAS2R1Q9NYW7 299 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 ZNRD1Q9P1U0 126 aa9.69□□□□□ -0.86
TTC28-203ENST00000442232 A0A0U1RQV5 110 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 TMEM269A0A1B0GVZ9 245 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 A0A1W2PRD5 423 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 A0A1W2PRF3 423 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 A0A1W2PRM7 423 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 MEIOCA2RUB1 952 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 ANKRD61A6NGH8 418 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 OR5B21A6NL26 309 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 OR2AT4A6NND4 320 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 ZNF732B4DXR9 585 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 M0R1W7 72 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 SIGLEC5O15389 551 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 KCNAB3O43448 404 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 MTRF1O75570 445 aaKnown RBP9.68□□□□□ -0.86
TTC28-203ENST00000442232 FCN3O75636 299 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 MRPL3P09001 348 aaKnown RBP9.68□□□□□ -0.86
TTC28-203ENST00000442232 SELLP14151 372 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 ATP6V1B1P15313 513 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 ALOX5APP20292 161 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 TGM4P49221 684 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 RIDAP52758 137 aaKnown RBP9.68□□□□□ -0.86
TTC28-203ENST00000442232 CAV3P56539 151 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 ACTR3P61158 418 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 CDK5Q00535 292 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 DEFA6Q01524 100 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 CEP78Q5JTW2 689 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 DEGS2Q6QHC5 323 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 ZNF788Q6ZQV5 615 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 TMEM179BQ7Z7N9 219 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 PIP4P2Q8N4L2 257 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 BBS1Q8NFJ9 593 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 OR5R1Q8NH85 324 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 C8orf46Q8TAG6 207 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 HPSE2Q8WWQ2 592 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 ASB17Q8WXJ9 295 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 LYZL4Q96KX0 146 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 MMP27Q9H306 513 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 METTL8Q9H825 291 aaKnown RBP9.68□□□□□ -0.86
TTC28-203ENST00000442232 TCF7L1Q9HCS4 588 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 PAPOLBQ9NRJ5 636 aaKnown RBP9.68□□□□□ -0.86
TTC28-203ENST00000442232 DNAJB9Q9UBS3 223 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 VPREB3Q9UKI3 123 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 IKZF2Q9UKS7 526 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 GTF2A1LQ9UNN4 478 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 KLHDC2Q9Y2U9 406 aa9.68□□□□□ -0.86
TTC28-203ENST00000442232 TRBV23-1A0A0A0MS06 115 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 A0A1W2PPH5 198 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 H0YAE9 185 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 RNASEK-C17orf49H0YIS7 233 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 GYG2O15488 501 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 FKBP6O75344 327 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 ZNF254O75437 659 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 ACAA1P09110 424 aaPredicted RBP9.67□□□□□ -0.86
TTC28-203ENST00000442232 T-ENOLP0DO92 83 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 SAA4P35542 130 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 UBE2E1P51965 193 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 SRSF4Q08170 494 aaKnown RBP9.67□□□□□ -0.86
TTC28-203ENST00000442232 RIPPLY1Q0D2K3 151 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 KLRD1Q13241 179 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 DGUOKQ16854 277 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 SMIM21Q3B7S5 101 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 CEACAM21Q3KPI0 293 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 ZNF684Q5T5D7 378 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 TMEM236Q5W0B7 351 aa9.67□□□□□ -0.86
TTC28-203ENST00000442232 C1orf122Q6ZSJ8 110 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms