RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 POM121CA8CG34 1229 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF879B4DU55 563 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 RPL36A-HNRNPH2H7BZ11 118 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 SS18L1O75177 396 aaPredicted RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 MED6O75586 246 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 SLC2A1P11166 492 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 MAPK3P27361 379 aaPredicted RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 PLA2G5P39877 138 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 SMCO1Q147U7 214 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 NRN1LQ496H8 165 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 Q499Y3 187 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ACSF3Q4G176 576 aaPredicted RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF585AQ6P3V2 769 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 CFAP161Q6P656 301 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ABHD12BQ7Z5M8 362 aaPredicted RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 SLC22A24Q8N4F4 322 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 CA5BP1Q8WTZ4 195 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 RGP1Q92546 391 aaPredicted RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 MEGF10Q96KG7 1140 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 DMRTA2Q96SC8 542 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 GGACTQ9BVM4 153 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 C12orf49Q9H741 205 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ZFP57Q9NU63 452 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 PLEK2Q9NYT0 353 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 TUBD1Q9UJT1 453 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 OR52A1Q9UKL2 312 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 TNRC6AQ8NDV7 1962 aaKnown RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 A0A1W2PPK0 400 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 FABP12A6NFH5 140 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 SRSF10O75494 262 aaKnown RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 RAB3DO95716 219 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 UCHL1P09936 223 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ANXA7P20073 488 aaKnown RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 GNALP38405 381 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 PRKXP51817 358 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 PSMA6P60900 246 aaKnown RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 GRB2P62993 217 aaKnown RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 HIST1H3AP68431 136 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ARF1P84077 181 aaKnown RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 HNRNPA0Q13151 305 aaKnown RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ODF4Q2M2E3 257 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 HIST2H3PS2Q5TEC6 136 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 OR2A2Q6IF42 318 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 UNQ9370/PRO34162Q6UXP9 181 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 HIST2H3AQ71DI3 136 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 FAM214BQ7L5A3 538 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 SLC16A14Q7RTX9 510 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 TGIF2LXQ8IUE1 241 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 RXFP4Q8TDU9 374 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ZCCHC14Q8WYQ9 949 aaKnown RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 THRSPQ92748 146 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 FBXO17Q96EF6 278 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ATF6BQ99941 703 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 PRDM13Q9H4Q3 707 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 PNRC2Q9NPJ4 139 aaKnown RBP7.07□□□□□ -1.28
CCDC39-201ENST00000442201 SLC5A6Q9Y289 635 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 SHISA3A0PJX4 238 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 SERPINA5P05154 406 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 GABRA1P14867 456 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 PCBD1P61457 104 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 DEFA5Q01523 94 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ELFN2Q5R3F8 820 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 BCL2L15Q5TBC7 163 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 UQCC3Q6UW78 93 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 SYT9Q86SS6 491 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 TPRA1Q86W33 373 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 GCNT2Q8N0V5 402 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 ORAI1Q96D31 301 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 R3HDM4Q96D70 268 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 TMPRSS13Q9BYE2 586 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 MOB1AQ9H8S9 216 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 FAM206AQ9NX38 181 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 CACNA1CQ13936 2221 aa7.07□□□□□ -1.28
CCDC39-201ENST00000442201 KIAA1549Q9HCM3 1950 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 TRAV1-2A0A0B4J238 106 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 TRBV5-5A0A0J9YX44 114 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 PLSCR5A0PG75 271 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 SMIM30A4D0T7 59 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 FIGNL2A6NMB9 653 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 L7N2F9 121 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 CXCL3P19876 107 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 OR3A2P47893 321 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 SOX2P48431 317 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 C9orf135Q5VTT2 229 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 TMEM244Q5VVB8 128 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 FBXW9Q5XUX1 488 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 NSUN5P2Q63ZY6 315 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 FGD2Q7Z6J4 655 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 PDZD9Q8IXQ8 264 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 PUSL1Q8N0Z8 303 aaKnown RBP7.06□□□□□ -1.28
CCDC39-201ENST00000442201 CISD2Q8N5K1 135 aaKnown RBP7.06□□□□□ -1.28
CCDC39-201ENST00000442201 ZNF283Q8N7M2 679 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 Q8NA96 180 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 TSEN15Q8WW01 171 aaKnown RBP7.06□□□□□ -1.28
CCDC39-201ENST00000442201 PPP1R14AQ96A00 147 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 MISP3Q96FF7 219 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 DERL3Q96Q80 235 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 HDHD2Q9H0R4 259 aa7.06□□□□□ -1.28
CCDC39-201ENST00000442201 BARX1Q9HBU1 254 aaPredicted RBP7.06□□□□□ -1.28
CCDC39-201ENST00000442201 SPACA1Q9HBV2 294 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms