RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 OR52K2Q8NGK3 314 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR1N2Q8NGR9 330 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 MUC7Q8TAX7 377 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 MCOLN3Q8TDD5 553 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 SRSF12Q8WXF0 261 aaKnown RBP2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 PSMF1Q92530 271 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 SGK3Q96BR1 496 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 FAIM2Q9BWQ8 316 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 SUCNR1Q9BXA5 334 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 DNTTIP1Q9H147 329 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 PARVGQ9HBI0 331 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 KLHL28Q9NXS3 571 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 COX16Q9P0S2 106 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 STOX2Q9P2F5 926 aaPredicted RBP2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 HMGXB4Q9UGU5 601 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 NXT1Q9UKK6 140 aaKnown RBP2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 VANGL2Q9ULK5 521 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 SLC17A4Q9Y2C5 497 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 FAM215AQ9Y5M1 114 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR51B4Q9Y5P0 310 aa2.06□□□□□ -2.08
HMGB3P12-201ENST00000438745 IGKV1D-13A0A0B4J2D9 117 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 IGHV3-64DA0A0J9YX35 117 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 A0A1W2PP18 115 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 PRSS37A4D1T9 235 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 DEFB108AA8MXU0 73 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 GOSR2O14653 212 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 MGRN1O60291 552 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 C1orf105O95561 183 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 IGKV1-13P0DP09 117 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR1E1P30953 314 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 OPRM1P35372 400 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 HSD17B2P37059 387 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 FDFT1P37268 417 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 GPR6P46095 362 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 NPBWR2P48146 333 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 SUB1P53999 127 aaKnown RBP eCLIP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 CDH4P55283 916 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 HMGN5P82970 282 aaKnown RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 GTF2BQ00403 316 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 DDX39BQ13838 428 aaKnown RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 PIGHQ14442 188 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 PTGES3Q15185 160 aaKnown RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 RBMY1FQ15415 496 aaKnown RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 SGCAQ16586 387 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 RSPO1Q2MKA7 263 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 PIGGQ5H8A4 983 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 C6orf226Q5I0X4 101 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 CTSL3PQ5NE16 218 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 PP632Q6XCG6 107 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 LINC00173Q6ZV60 143 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 CAMK2N1Q7Z7J9 78 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 LUZP2Q86TE4 346 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 SETD3Q86TU7 594 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 PSTKQ8IV42 348 aaKnown RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR4F6Q8NGB9 312 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR10G9Q8NGN4 311 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR13C2Q8NGS9 318 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR2G3Q8NGZ4 309 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 GEMIN6Q8WXD5 167 aaKnown RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 CAPZA3Q96KX2 299 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 GABARAPL3Q9BY60 117 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 RANBP3Q9H6Z4 567 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 NIPAL2Q9H841 368 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 WDR54Q9H977 334 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 UGT1A7Q9HAW7 530 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 UGT1A10Q9HAW8 530 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 UGT1A8Q9HAW9 530 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 NECAP2Q9NVZ3 263 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 HRASLS2Q9NWW9 162 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 PDP1Q9P0J1 537 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 XCL2Q9UBD3 114 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 ZNF629Q9UEG4 869 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 C3orf18Q9UK00 162 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 HPCAL4Q9UM19 191 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 PACSIN2Q9UNF0 486 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 KLF13Q9Y2Y9 288 aaPredicted RBP2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 PEX16Q9Y5Y5 336 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 U3KQK5 164 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 FREM1Q5H8C1 2179 aa2.05□□□□□ -2.08
HMGB3P12-201ENST00000438745 HRNRQ86YZ3 2850 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 A0A096LNJ9 63 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 A0A096LNT2 108 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 A0A0D9SEW6 157 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 A0A1W2PPV9 198 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 OR6C74A6NCV1 312 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 H3BNH8 94 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 SLC31A2O15432 143 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 ICOSLGO75144 302 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 SS18L1O75177 396 aaPredicted RBP2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 TMEM50AO95807 157 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 IGHV2-5P01817 119 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 IGHDP01880 384 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 IGKV3-11P04433 115 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 SLC2A3P11169 496 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 COX6A1P12074 109 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 CR1P17927 2039 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 CRYGSP22914 178 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 CXCL5P42830 114 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 CDKN1BP46527 198 aa2.04□□□□□ -2.08
HMGB3P12-201ENST00000438745 RORCP51449 518 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 143.8 ms