RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 DHFR2Q86XF0 187 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 ZDHHC23Q8IYP9 409 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 ARHGAP24Q8N264 748 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 IQCF1Q8N6M8 205 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 DTX3Q8N9I9 347 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 TMEM185AQ8NFB2 350 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 OR10G2Q8NGC3 310 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 OR5T2Q8NGG2 359 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 OR51G2Q8NGK0 314 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 OR5D13Q8NGL4 314 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 OR10Z1Q8NGY1 313 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 OR4Q3Q8NH05 313 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 THEM6Q8WUY1 208 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 RPL3LQ92901 407 aaKnown RBP6.38□□□□□ -1.39
VPS50-203ENST00000436177 SGK3Q96BR1 496 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 RNF170Q96K19 258 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 DCTN5Q9BTE1 182 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 DGCR6LQ9BY27 220 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 NMNAT2Q9BZQ4 307 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 MRPL18Q9H0U6 180 aaKnown RBP6.38□□□□□ -1.39
VPS50-203ENST00000436177 OR51V1Q9H2C8 321 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 SEMA6AQ9H2E6 1030 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 PPA2Q9H2U2 334 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 NIPAL2Q9H841 368 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 MED20Q9H944 212 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 SNTG1Q9NSN8 517 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 ZNRD1Q9P1U0 126 aa6.38□□□□□ -1.39
VPS50-203ENST00000436177 DOCK11Q5JSL3 2073 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 TRBV23-1A0A0A0MS06 115 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 ZNF816-ZNF321PA0A0X1KG74 233 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 A0A1B0GW55 424 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 hCG_1809904A0A1W2PP81 198 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 A0A1W2PPE2 198 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 A0A1W2PR64 198 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 A0A1W2PRV1 198 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 ZNF850A8MQ14 1090 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 M0R1W7 72 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 AKR7A2O43488 359 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 ANGPTL7O43827 346 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 CLPXO76031 633 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 GLCEO94923 617 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 DUX4L2P0CJ85 424 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 DUX4L3P0CJ86 424 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 DUX4L4P0CJ87 422 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 DUX4L5P0CJ88 424 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 DUX4L6P0CJ89 424 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 DUX4L7P0CJ90 424 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 ANOS1P23352 680 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 GLRA1P23415 457 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 MAGEA2P43356 314 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 GPM6AP51674 278 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 UBE2E1P51965 193 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 PROK1P58294 105 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 GNG3P63215 75 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 EGR3Q06889 387 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 ACSM1Q08AH1 577 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 PPP1R8Q12972 351 aaKnown RBP6.37□□□□□ -1.39
VPS50-203ENST00000436177 KLRD1Q13241 179 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 GK3PQ14409 553 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 MICAQ29983 383 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 SMIM21Q3B7S5 101 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 ASPHD2Q6ICH7 369 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 ZNF770Q6IQ21 691 aaPredicted RBP6.37□□□□□ -1.39
VPS50-203ENST00000436177 C11orf88Q6PI97 169 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 DUX4L9Q6RFH8 374 aaPredicted RBP6.37□□□□□ -1.39
VPS50-203ENST00000436177 THAP5Q7Z6K1 395 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 KRT77Q7Z794 578 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 FAM185AQ8N0U4 392 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 ZSCAN4Q8NAM6 433 aaPredicted RBP6.37□□□□□ -1.39
VPS50-203ENST00000436177 FAM110DQ8TAY7 271 aaPredicted RBP6.37□□□□□ -1.39
VPS50-203ENST00000436177 GIPC3Q8TF64 312 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 ZNRF4Q8WWF5 429 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 PIGCQ92535 297 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 CCDC124Q96CT7 223 aaKnown RBP6.37□□□□□ -1.39
VPS50-203ENST00000436177 SEH1LQ96EE3 360 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 CLPTM1LQ96KA5 538 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 RAB3IPQ96QF0 476 aaPredicted RBP6.37□□□□□ -1.39
VPS50-203ENST00000436177 DDOQ99489 341 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 WDR13Q9H1Z4 485 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 RAB18Q9NP72 206 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 ARL8BQ9NVJ2 186 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 NLKQ9UBE8 527 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 DUX4Q9UBX2 424 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 LAMP5Q9UJQ1 280 aa6.37□□□□□ -1.39
VPS50-203ENST00000436177 SF3B6Q9Y3B4 125 aaKnown RBP6.37□□□□□ -1.39
VPS50-203ENST00000436177 OR5B21A6NL26 309 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 OR2AT4A6NND4 320 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 RNASEK-C17orf49H0YIS7 233 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 H3BUX3 64 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.36□□□□□ -1.39
VPS50-203ENST00000436177 SLC1A7O00341 560 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 SIGLEC5O15389 551 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 GSC2O15499 205 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 PRODHO43272 600 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 SELENOFO60613 162 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 TSPAN15O95858 294 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 CST4P01036 141 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 CST1P01037 141 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 GHRHP01286 108 aa6.36□□□□□ -1.39
VPS50-203ENST00000436177 HMGN1P05114 100 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms