RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 BET1O15155 118 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 ERI3O43414 337 aaKnown RBP3.83□□□□□ -1.8
USP54-206ENST00000433394 SLC16A7O60669 478 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 KRT34O76011 436 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 YIF1AO95070 293 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 SMC2O95347 1197 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 CATP04040 527 aaKnown RBP3.83□□□□□ -1.8
USP54-206ENST00000433394 HOXC4P09017 264 aaPredicted RBP3.83□□□□□ -1.8
USP54-206ENST00000433394 TACSTD2P09758 323 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 ZNF688P0C7X2 276 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 TLX1NBP0CAT3 122 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 PGA4P0DJD7 388 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 PGA3P0DJD8 388 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 ZNF823P16415 610 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 ARL2P36404 184 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 CSKP41240 450 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 ETV1P50549 477 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 CCNG1P51959 295 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 TAS2R39P59534 338 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 KRTAP10-3P60369 221 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 PFN3P60673 137 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 ATP6V0D1P61421 351 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 ESRRGP62508 458 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 IFITM3Q01628 133 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 TRDNQ13061 729 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 Q6P435 159 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 ZFP2Q6ZN57 461 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 RTL4Q6ZR62 310 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 KRTAP11-1Q8IUC1 163 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 RIMKLAQ8IXN7 391 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 FAM58AQ8N1B3 248 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 TRIML2Q8N7C3 387 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 OR51L1Q8NGJ5 315 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 UQCC2Q9BRT2 126 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 TM6SF2Q9BZW4 377 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 NAA50Q9GZZ1 169 aaKnown RBP3.83□□□□□ -1.8
USP54-206ENST00000433394 ZDHHC4Q9NPG8 344 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 ENOPH1Q9UHY7 261 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 PSG11Q9UQ72 335 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 KPTNQ9Y664 436 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 PCDH11XQ9BZA7 1347 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 LRP6O75581 1613 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 SCN11AQ9UI33 1791 aa3.83□□□□□ -1.8
USP54-206ENST00000433394 VIRMAQ69YN4 1812 aaKnown RBP3.83□□□□□ -1.8
USP54-206ENST00000433394 TET2Q6N021 2002 aaPredicted RBP3.83□□□□□ -1.8
USP54-206ENST00000433394 WNK3Q9BYP7 1800 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 SLIT2O94813 1529 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 MRC1P22897 1456 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 IBTKQ9P2D0 1353 aaPredicted RBP3.82□□□□□ -1.8
USP54-206ENST00000433394 IGKV2D-24A0A075B6R9 120 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 IGHV1OR15-9A0A0B4J2B8 117 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 A0A0J9YXV3 536 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 TAAR5O14804 337 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 KLK1P06870 262 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 ARR3P36575 388 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 ERFP50548 548 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 CACNG7P62955 275 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 PPIDQ08752 370 aaKnown RBP3.82□□□□□ -1.8
USP54-206ENST00000433394 GCSAMLQ5JQS6 135 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 NDUFAF7Q7L592 441 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 MDP1Q86V88 176 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 SLC30A8Q8IWU4 369 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 PDCL2Q8N4E4 241 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 SPERTQ8NA61 448 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 C11orf72Q8NBR9 251 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 ZNF707Q96C28 371 aaPredicted RBP3.82□□□□□ -1.8
USP54-206ENST00000433394 FLYWCH2Q96CP2 140 aaKnown RBP3.82□□□□□ -1.8
USP54-206ENST00000433394 LRRC39Q96DD0 335 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 AGMATQ9BSE5 352 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 RSG1Q9BU20 258 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 XKR8Q9H6D3 395 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 REEP1Q9H902 201 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 RRAGDQ9NQL2 400 aaPredicted RBP3.82□□□□□ -1.8
USP54-206ENST00000433394 STK38LQ9Y2H1 464 aa3.82□□□□□ -1.8
USP54-206ENST00000433394 V9GYY5 206 aaPredicted RBP3.82□□□□□ -1.8
USP54-206ENST00000433394 SIPA1L3O60292 1781 aaPredicted RBP3.81□□□□□ -1.8
USP54-206ENST00000433394 RGPD2P0DJD1 1756 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 NRAPQ86VF7 1730 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 BCL9O00512 1426 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 IGKV6D-21A0A0A0MT36 114 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 ANKRD63C9JTQ0 380 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 CETN3O15182 167 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 NMT2O60551 498 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 EIF1BO60739 113 aaKnown RBP3.81□□□□□ -1.8
USP54-206ENST00000433394 UPK1BO75841 260 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 PAHP00439 452 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 APCSP02743 223 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 C1GALT1C1LP0DN25 315 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 EIF1P41567 113 aaKnown RBP3.81□□□□□ -1.8
USP54-206ENST00000433394 BLVRAP53004 296 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 OR2B8PP59922 312 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 RPL23P62829 140 aaKnown RBP3.81□□□□□ -1.8
USP54-206ENST00000433394 CDK5Q00535 292 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 SLAQ13239 276 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 NAB1Q13506 487 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 PTGES3Q15185 160 aaKnown RBP3.81□□□□□ -1.8
USP54-206ENST00000433394 MPV17L2Q567V2 206 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 OR2T5Q6IEZ7 315 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 RAB43Q86YS6 212 aa3.81□□□□□ -1.8
USP54-206ENST00000433394 ASCC1Q8N9N2 400 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms