RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 Q499Y3 187 aa8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 CCDC58Q4VC31 144 aa8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 C1QL2Q7Z5L3 287 aa8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 OR10K1Q8NGX5 313 aa8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 GPR148Q8TDV2 347 aa8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 FAM46BQ96A09 425 aa8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 KCTD12Q96CX2 325 aaKnown RBP8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 SEH1LQ96EE3 360 aa8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 MARVELD1Q9BSK0 173 aa8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 TRAF4Q9BUZ4 470 aaPredicted RBP8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 SLA2Q9H6Q3 261 aa8.17□□□□□ -1.1
HMGCLL1-206ENST00000428842 AKAP9Q99996 3911 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 IGKV1-27A0A075B6S5 117 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 FAM230AA0A1W2PPH8 454 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 ANGPTL7O43827 346 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 CNOT4O95628 575 aaKnown RBP8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 IGLV1-44P01699 117 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 FCER2P06734 321 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 PTHLHP12272 177 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 ELK1P19419 428 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 THBS2P35442 1172 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 ASCL1P50553 236 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 PPP1CBP62140 327 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 TATDN3Q17R31 274 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 YIF1BQ5BJH7 314 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 DEGS2Q6QHC5 323 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 DRAM2Q6UX65 266 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 PGAP1Q75T13 922 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 OR14K1Q8NGZ2 314 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 KLF14Q8TD94 323 aaPredicted RBP8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 PIK3IP1Q96FE7 263 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 MNTQ99583 582 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 TMEM246Q9BRR3 403 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 PIGMQ9H3S5 423 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 ZNF275Q9NSD4 429 aaPredicted RBP8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 HHLA2Q9UM44 414 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 ALG5Q9Y673 324 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 PDZD2O15018 2839 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 CUBNO60494 3623 aa8.16□□□□□ -1.1
HMGCLL1-206ENST00000428842 TRBV5-5A0A0J9YX44 114 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 hCG_38984A0A1B0GV85 526 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 A0A1B0GVI7 797 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 SPRY1O43609 319 aaPredicted RBP8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 SNRPBP14678 240 aaKnown RBP8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 THBS4P35443 961 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 ALDH3B1P43353 468 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 TRAM1Q15629 374 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 IDNKQ5T6J7 187 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 MTFR2Q6P444 385 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 CRIP3Q6Q6R5 217 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 COLCA1Q6ZS62 124 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 UTS2BQ765I0 119 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 GLCCI1Q86VQ1 547 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 LRRC28Q86X40 367 aaPredicted RBP8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 SERPINA12Q8IW75 414 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 DMRTC2Q8IXT2 367 aaPredicted RBP8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 UBASH3BQ8TF42 649 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 NANOS1Q8WY41 292 aaKnown RBP8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 GCDHQ92947 438 aaPredicted RBP8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 UPRTQ96BW1 309 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 ZNF488Q96MN9 340 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 PAPOLGQ9BWT3 736 aaKnown RBP8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 PLEKHA1Q9HB21 404 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 PLSCR3Q9NRY6 295 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 CYSLTR2Q9NS75 346 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 BOLA1Q9Y3E2 137 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 ARHGAP32A7KAX9 2087 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 DSCAMO60469 2012 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 A0A0G2JK05 382 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 A0A1B0GUH1 482 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 FAM240BA0A1B0GVZ2 78 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 MEX3AA1L020 520 aaKnown RBP8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 CLDN14O95500 239 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 CLDN1O95832 211 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 NAT2P11245 290 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 ATF1P18846 271 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 MMP15P51511 669 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 SNU13P55769 128 aaKnown RBP8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 CD83Q01151 205 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 NRN1LQ496H8 165 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 HSD17B12Q53GQ0 312 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 Q5BKY6 102 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 FDX2Q6P4F2 183 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 Q6ZR03 302 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 BIVMQ86UB2 503 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 JAGN1Q8N5M9 183 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 OR4D6Q8NGJ1 314 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 OR5H6Q8NGV6 325 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 OR10A2Q9H208 303 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 NLKQ9UBE8 527 aa8.15□□□□□ -1.1
HMGCLL1-206ENST00000428842 ARPC4-TTLL3A0A0A6YYG9 625 aa8.14□□□□□ -1.11
HMGCLL1-206ENST00000428842 ANKRD34BA5PLL1 514 aa8.14□□□□□ -1.11
HMGCLL1-206ENST00000428842 FAM25AB3EWG3 89 aa8.14□□□□□ -1.11
HMGCLL1-206ENST00000428842 FAM25CB3EWG5 89 aa8.14□□□□□ -1.11
HMGCLL1-206ENST00000428842 FAM25GB3EWG6 89 aa8.14□□□□□ -1.11
HMGCLL1-206ENST00000428842 F8VVB4 439 aa8.14□□□□□ -1.11
HMGCLL1-206ENST00000428842 F8VWA3 439 aa8.14□□□□□ -1.11
HMGCLL1-206ENST00000428842 UCHL1P09936 223 aa8.14□□□□□ -1.11
HMGCLL1-206ENST00000428842 ERP29P30040 261 aaKnown RBP8.14□□□□□ -1.11
HMGCLL1-206ENST00000428842 OR3A4PP47883 348 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms