RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 FOXB1Q99853 325 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 EDEM2Q9BV94 578 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 ALX4Q9H161 411 aaPredicted RBP10.1□□□□□ -0.79
UBR4-207ENST00000425413 CALHM2Q9HA72 323 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 TMEM38BQ9NVV0 291 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 C9orf170A2RU37 121 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 FAM221AA4D161 298 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 C5orf51A6NDU8 294 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 CD59P13987 128 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 MAGEA5P43359 124 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 OR3A2P47893 321 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 ATP1B3P54709 279 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 FOXG1P55316 489 aaPredicted RBP10.1□□□□□ -0.79
UBR4-207ENST00000425413 RPS27AP62979 156 aaKnown RBP10.1□□□□□ -0.79
UBR4-207ENST00000425413 PSG4Q00888 419 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 FOXO1Q12778 655 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 TAF9Q16594 264 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 LYG2Q86SG7 212 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 RELL2Q8NC24 303 aaPredicted RBP10.1□□□□□ -0.79
UBR4-207ENST00000425413 OR1F12Q8NHA8 337 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 DYRK2Q92630 601 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 LINC00052Q96N35 136 aa10.1□□□□□ -0.79
UBR4-207ENST00000425413 B8ZZF3 427 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 TSPAN4O14817 238 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 HPNP05981 417 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 ZBTB25P24278 435 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 SNU13P55769 128 aaKnown RBP10.09□□□□□ -0.79
UBR4-207ENST00000425413 TSPO2Q5TGU0 170 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 GSG1LQ6UXU4 331 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 OR2W3Q7Z3T1 314 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 SLC25A42Q86VD7 318 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 SKA3Q8IX90 412 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 ZBTB44Q8NCP5 570 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 SEMA6DQ8NFY4 1073 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 OR5H2Q8NGV7 314 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 PPP1R1CQ8WVI7 109 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 KCNE4Q8WWG9 221 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 CHST5Q9GZS9 411 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 NUP50Q9UKX7 468 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 A0A0U1RQV5 110 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 CDX4O14627 284 aaPredicted RBP10.09□□□□□ -0.79
UBR4-207ENST00000425413 TPD52L2O43399 206 aaKnown RBP10.09□□□□□ -0.79
UBR4-207ENST00000425413 NEURL1O76050 574 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 CTSSP25774 331 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 THBS4P35443 961 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 FAM74A1Q5RGS3 127 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 TMEM164Q5U3C3 297 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 OR5M8Q8NGP6 311 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 EHFQ9NZC4 300 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 PCNX2A6NKB5 2137 aa10.09□□□□□ -0.79
UBR4-207ENST00000425413 IGKV1D-8A0A087WSZ0 117 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 MFNGO00587 321 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 EFSO43281 561 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 SYNGR3O43761 229 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 MTRF1O75570 445 aaKnown RBP10.08□□□□□ -0.8
UBR4-207ENST00000425413 RRADP55042 308 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 DHODHQ02127 395 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 GK2Q14410 553 aaPredicted RBP10.08□□□□□ -0.8
UBR4-207ENST00000425413 GLRX5Q86SX6 157 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 CDH26Q8IXH8 852 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 OR2M7Q8NG81 312 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 FNDC9Q8TBE3 224 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 ADGRG7Q96K78 797 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 SF3B5Q9BWJ5 86 aaKnown RBP10.08□□□□□ -0.8
UBR4-207ENST00000425413 PLEKHJ1Q9NW61 149 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 COMMD9Q9P000 198 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 NOSIPQ9Y314 301 aaKnown RBP10.08□□□□□ -0.8
UBR4-207ENST00000425413 V9GYS6 101 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 BOD1L1Q8NFC6 3051 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 IGKV1-27A0A075B6S5 117 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 SCGNO76038 276 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 TNFSF15O95150 251 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 KNG1P01042 644 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 NMBP08949 121 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 GSTP1P09211 210 aaKnown RBP10.08□□□□□ -0.8
UBR4-207ENST00000425413 PRF1P14222 555 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 CNR1P21554 472 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 CRYGSP22914 178 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 OTX1P32242 354 aaPredicted RBP10.08□□□□□ -0.8
UBR4-207ENST00000425413 OPRM1P35372 400 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 HIST1H3AP68431 136 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 PLGLB1Q02325 96 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 RAB35Q15286 201 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 TGIF1Q15583 401 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 OR1C1Q15619 314 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 CLVS2Q5SYC1 327 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 HIST2H3PS2Q5TEC6 136 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 FOXL2NBQ6ZUU3 175 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 HIST2H3AQ71DI3 136 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 SULF2Q8IWU5 870 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 TERB2Q8NHR7 220 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 NTNG2Q96CW9 530 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 PHB2Q99623 299 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 PECRQ9BY49 303 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 TMPRSS13Q9BYE2 586 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 GPR35Q9HC97 309 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 PFDN2Q9UHV9 154 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 MCTS1Q9ULC4 181 aaKnown RBP10.08□□□□□ -0.8
UBR4-207ENST00000425413 LOC105371267A0A1B0GV96 52 aa10.08□□□□□ -0.8
UBR4-207ENST00000425413 NUPL2O15504 423 aaKnown RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms