RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 FGF12P61328 243 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 IL13RA1P78552 427 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 ROM1Q03395 351 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 SRSF4Q08170 494 aaKnown RBP10.75□□□□□ -0.69
VRK3-203ENST00000424804 RCN1Q15293 331 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 SNCBQ16143 134 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 DMRTC1Q5HYR2 192 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 BRD3OSQ6XYD6 125 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 DCDC5Q6ZRR9 648 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 FAM220AQ7Z4H9 259 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 ZNF555Q8NEP9 628 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 OR2T27Q8NH04 317 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 TRUB1Q8WWH5 349 aaKnown RBP10.75□□□□□ -0.69
VRK3-203ENST00000424804 ERGIC1Q969X5 290 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 SLC25A28Q96A46 364 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 TMIGD2Q96BF3 282 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 HAO2Q9NYQ3 351 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 MRM2Q9UI43 246 aaKnown RBP10.75□□□□□ -0.69
VRK3-203ENST00000424804 OR52A1Q9UKL2 312 aa10.75□□□□□ -0.69
VRK3-203ENST00000424804 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.75□□□□□ -0.69
VRK3-203ENST00000424804 IGHV3OR15-7A0A075B7D8 119 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 ERICH4A6NGS2 130 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 P2RY10O00398 339 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 HOXA3O43365 443 aaPredicted RBP10.74□□□□□ -0.69
VRK3-203ENST00000424804 OMGP23515 440 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 MTNR1AP48039 350 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 KRTAP10-3P60369 221 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 CSNK2BP67870 215 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 IL5RAQ01344 420 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 EGR3Q06889 387 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 TP53I3Q53FA7 332 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 CEP78Q5JTW2 689 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 LPCAT4Q643R3 524 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 BTNL3Q6UXE8 466 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 Q6YL49 198 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 MOB3CQ70IA8 216 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 ZDHHC23Q8IYP9 409 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 OR8B3Q8NGG8 313 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 RNF170Q96K19 258 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 OR8B2Q96RD0 313 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 TBX15Q96SF7 602 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 RTL8AQ9BWD3 113 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 NUFIP1Q9UHK0 495 aaKnown RBP10.74□□□□□ -0.69
VRK3-203ENST00000424804 ZNF391Q9UJN7 358 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 GNG8Q9UK08 70 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 SLC22A13Q9Y226 551 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 PIGLQ9Y2B2 252 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 R4GMQ9 66 aa10.74□□□□□ -0.69
VRK3-203ENST00000424804 A0A0U1RQV5 110 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 ZNF816-ZNF321PA0A0X1KG74 233 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 LOC100130705A0A1B0GUX0 176 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 DAPL1A0PJW8 107 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 A6NIN4 97 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 METTL15A6NJ78 407 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 ACOD1A6NK06 481 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 SNTNA6NMZ2 147 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 TTRP02766 147 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 SFTPBP07988 381 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 FAHP16930 419 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 DCTDP32321 178 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 SNRPGP62308 76 aaKnown RBP10.73□□□□□ -0.69
VRK3-203ENST00000424804 TMED1Q13445 227 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 MEDAGQ5VYS4 303 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 PLCXD3Q63HM9 321 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 RUSC1-AS1Q66K80 236 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 TREML4Q6UXN2 200 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 NLRC3Q7RTR2 1065 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 WDR86Q86TI4 376 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 C11orf53Q8IXP5 236 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 ENTHD1Q8IYW4 607 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 OR1M1Q8NGA1 313 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 LRRC29Q8WV35 223 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 CYGBQ8WWM9 190 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 RPL3LQ92901 407 aaKnown RBP10.73□□□□□ -0.69
VRK3-203ENST00000424804 MOB1AQ9H8S9 216 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 SMURF1Q9HCE7 757 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 AMBNQ9NP70 447 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 FAM118AQ9NWS6 357 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 SMPD3Q9NY59 655 aaPredicted RBP10.73□□□□□ -0.69
VRK3-203ENST00000424804 CLN8Q9UBY8 286 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 MPC1Q9Y5U8 109 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 SNX5Q9Y5X3 404 aa10.73□□□□□ -0.69
VRK3-203ENST00000424804 CENPVL3A0A0U1RRI6 287 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 FAM181BA6NEQ2 426 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 SRRM5B3KS81 715 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 LGALS8O00214 317 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 CDIPTO14735 213 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 MTRF1O75570 445 aaKnown RBP10.72□□□□□ -0.69
VRK3-203ENST00000424804 LHBP01229 141 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 GYPAP02724 150 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 CFHR2P36980 270 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 GPM6AP51674 278 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 ELF3P78545 371 aaPredicted RBP10.72□□□□□ -0.69
VRK3-203ENST00000424804 ZNF85Q03923 595 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 RIPPLY1Q0D2K3 151 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 OCLNQ16625 522 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 ELMOD2Q8IZ81 293 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 GCSAMQ8N6F7 178 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 PLPP7Q8NBV4 271 aa10.72□□□□□ -0.69
VRK3-203ENST00000424804 ITPKCQ96DU7 683 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms