RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 OR5R1Q8NH85 324 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 BCAS4Q8TDM0 211 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 RNF133Q8WVZ7 376 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 MCUR1Q96AQ8 359 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 OTULINQ96BN8 352 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 C12orf43Q96C57 262 aaKnown RBP6.58□□□□□ -1.36
VIM-202ENST00000421459 PGAM5Q96HS1 289 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 RNF170Q96K19 258 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 ZNF488Q96MN9 340 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 CDRT15Q96T59 188 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 MICU1Q9BPX6 476 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 ELAC2Q9BQ52 826 aaKnown RBP6.58□□□□□ -1.36
VIM-202ENST00000421459 OPA3Q9H6K4 179 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 METTL8Q9H825 291 aaKnown RBP6.58□□□□□ -1.36
VIM-202ENST00000421459 YY1AP1Q9H869 796 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 IL1RAPQ9NPH3 570 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 C19orf12Q9NSK7 152 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 AURKAIP1Q9NWT8 199 aaPredicted RBP6.58□□□□□ -1.36
VIM-202ENST00000421459 IL20Q9NYY1 176 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 NLKQ9UBE8 527 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 CD300AQ9UGN4 299 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 KLHDC2Q9Y2U9 406 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 ZNF281Q9Y2X9 895 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 LYVE1Q9Y5Y7 322 aa6.58□□□□□ -1.36
VIM-202ENST00000421459 NKX6-3A6NJ46 265 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 M0R1W7 72 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 NDUFAB1O14561 156 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 SELENOFO60613 162 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 TIPRLO75663 272 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 H2BFMP0C1H6 154 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 GLRA1P23415 457 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 COX7A1P24310 79 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 GSTT1P30711 240 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 DCTDP32321 178 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 SLC15A1P46059 708 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 CEBPDP49716 269 aaPredicted RBP6.57□□□□□ -1.36
VIM-202ENST00000421459 HMGA2P52926 109 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 SLC25A1P53007 311 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 GRB2P62993 217 aaKnown RBP6.57□□□□□ -1.36
VIM-202ENST00000421459 ACSM1Q08AH1 577 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 LRRC75BQ2VPJ9 315 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 CEP78Q5JTW2 689 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 CCBE1Q6UXH8 406 aaPredicted RBP6.57□□□□□ -1.36
VIM-202ENST00000421459 CYP2R1Q6VVX0 501 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 RASSF6Q6ZTQ3 369 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 CPLX4Q7Z7G2 160 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 TIGD4Q8IY51 512 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 C11orf42Q8N5U0 333 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 TMEM185AQ8NFB2 350 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 OR4M1Q8NGD0 313 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 OR4C13Q8NGP0 309 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 SGCDQ92629 289 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 PPP1R14AQ96A00 147 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 CMTM5Q96DZ9 223 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 MED30Q96HR3 178 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 NSMCE2Q96MF7 247 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 OR5M11Q96RB7 305 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 INTS14Q96SY0 518 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 RTL8AQ9BWD3 113 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 MEGF9Q9H1U4 602 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 OR10A2Q9H208 303 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 OR51V1Q9H2C8 321 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 ZNF702PQ9H963 129 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 SERTAD4Q9NUC0 356 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 MAGEL2Q9UJ55 1249 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 ZNF222Q9UK12 451 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 SF3B6Q9Y3B4 125 aaKnown RBP6.57□□□□□ -1.36
VIM-202ENST00000421459 U3KQV3 271 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 DOCK11Q5JSL3 2073 aa6.57□□□□□ -1.36
VIM-202ENST00000421459 ANXA2P2A6NMY6 339 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 ADARB2-AS1A8MUL3 147 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 ZNF732B4DXR9 585 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 PSMD9O00233 223 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 CCNB2O95067 398 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 CST4P01036 141 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 HSD17B1P14061 328 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 CCL3L1P16619 93 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 ATP6V1B2P21281 511 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 CAPZA1P52907 286 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 CAV3P56539 151 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 LOXL3P58215 753 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 IL5RAQ01344 420 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 BLMHQ13867 455 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 FAM76BQ5HYJ3 339 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 LDLRAD2Q5SZI1 272 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 NCR3LG1Q68D85 454 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 TMEM200BQ69YZ2 307 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 ZNF782Q6ZMW2 699 aaPredicted RBP6.56□□□□□ -1.36
VIM-202ENST00000421459 TMEM219Q86XT9 240 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 CD177Q8N6Q3 437 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 CSNK2A3Q8NEV1 391 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 OR2T33Q8NG76 320 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 OR8B12Q8NGG6 310 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 OR10Z1Q8NGY1 313 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 OR2T6Q8NHC8 308 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 THEM6Q8WUY1 208 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 R3HDM4Q96D70 268 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 CLPTM1LQ96KA5 538 aa6.56□□□□□ -1.36
VIM-202ENST00000421459 CITED2Q99967 270 aaPredicted RBP6.56□□□□□ -1.36
VIM-202ENST00000421459 NIPSNAP1Q9BPW8 284 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms