RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 UFSP2Q9NUQ7 469 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 BEX4Q9NWD9 120 aaPredicted RBP7.2□□□□□ -1.26
TRIM48-201ENST00000417545 PPP1R3CQ9UQK1 317 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 POLDIP2Q9Y2S7 368 aa7.2□□□□□ -1.26
TRIM48-201ENST00000417545 HELZ2Q9BYK8 2649 aaKnown RBP7.2□□□□□ -1.26
TRIM48-201ENST00000417545 IGHV1-69-2A0A0G2JMI3 117 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 TRDV1A0A1B0GX56 115 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 LRP5LA4QPB2 252 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 MEGF11A6BM72 1044 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 SSX4O60224 188 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 CDC14BO60729 498 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 DAOP14920 347 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 FSTP19883 344 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 GALP22466 123 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 CD200P41217 278 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 RANBP1P43487 201 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 HAAOP46952 286 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 PTH2RP49190 550 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 POU3F4P49335 361 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 EFNA4P52798 201 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 MTCP1P56278 107 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 KRTAP10-9P60411 292 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 RPS11P62280 158 aaKnown RBP eCLIP7.19□□□□□ -1.26
TRIM48-201ENST00000417545 LSM3P62310 102 aaKnown RBP7.19□□□□□ -1.26
TRIM48-201ENST00000417545 TNK1Q13470 666 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 INSL4Q14641 139 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 DMRTC1Q5HYR2 192 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 TMEM255AQ5JRV8 349 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 GPR107Q5VW38 600 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 PRAMEF6Q5VXH4 476 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 CLEC2AQ6UVW9 174 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 Q6ZSR3 168 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 MOGAT3Q86VF5 341 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 CLVS1Q8IUQ0 354 aaPredicted RBP7.19□□□□□ -1.26
TRIM48-201ENST00000417545 C1orf87Q8N0U7 546 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 NKAIN3Q8N8D7 197 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 BOLLQ8N9W6 283 aaKnown RBP7.19□□□□□ -1.26
TRIM48-201ENST00000417545 OR13F1Q8NGS4 319 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 UBASH3BQ8TF42 649 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 OR5P3Q8WZ94 311 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 NINJ1Q92982 152 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 RFT1Q96AA3 541 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 ORAI1Q96D31 301 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 ITPKCQ96DU7 683 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 TIMD4Q96H15 378 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 KCTD7Q96MP8 289 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 OR51E2Q9H255 320 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 ELL3Q9HB65 397 aaPredicted RBP7.19□□□□□ -1.26
TRIM48-201ENST00000417545 PLGRKTQ9HBL7 147 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 TMEM138Q9NPI0 162 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 SNTG1Q9NSN8 517 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 C1orf123Q9NWV4 160 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 FOXJ3Q9UPW0 622 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 COL12A1Q99715 3063 aa7.19□□□□□ -1.26
TRIM48-201ENST00000417545 SPTAN1Q13813 2472 aaKnown RBP7.19□□□□□ -1.26
TRIM48-201ENST00000417545 TRBV5-7A0A0A0MS05 114 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 CLDN25C9JDP6 229 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 IFNL4K9M1U5 179 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 CD55P08174 381 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 ADH4P08319 380 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 UCHL1P09936 223 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 ZNF93P35789 620 aaPredicted RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 GMFBP60983 142 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 UBE2V2Q15819 145 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 DEFB113Q30KQ7 82 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 FAM27D1Q5T7N8 215 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 GLT8D1Q68CQ7 371 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 TMEM42Q69YG0 159 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 HAGHLQ6PII5 290 aaPredicted RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 FIP1L1Q6UN15 594 aaKnown RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 GDPGP1Q6ZNW5 385 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 CELF2-AS1Q8N7Q2 184 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 DNAAF1Q8NEP3 725 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 ZNF671Q8TAW3 534 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 HPSE2Q8WWQ2 592 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 CCL17Q92583 94 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 RDH5Q92781 318 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 ERGIC1Q969X5 290 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 SPACA5Q96QH8 159 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 FUNDC2Q9BWH2 189 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 PPP1R3EQ9H7J1 279 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 MYOZ1Q9NP98 299 aaPredicted RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 DLL4Q9NR61 685 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 TXNL4BQ9NX01 149 aaKnown RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 TREM2Q9NZC2 230 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 DNAJB11Q9UBS4 358 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 SF3B6Q9Y3B4 125 aaKnown RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 PLCE1Q9P212 2302 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 UTP20O75691 2785 aaKnown RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 TRAV8-7A0A075B6U6 113 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 PQLC2LA1A4F0 135 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 ISPDA4D126 451 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 TRAPPC2LH3BP13 241 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 J3QT63 122 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 CDIPTO14735 213 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 PPIHO43447 177 aaKnown RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 F12P00748 615 aaPredicted RBP7.18□□□□□ -1.26
TRIM48-201ENST00000417545 HPXP02790 462 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 TFAP2AP05549 437 aa7.18□□□□□ -1.26
TRIM48-201ENST00000417545 CSF3P09919 207 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms