RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 KCTD12Q96CX2 325 aaKnown RBP12.14□□□□□ -0.47
SF3B1-204ENST00000414963 MICU1Q9BPX6 476 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 SLIRPQ9GZT3 109 aaKnown RBP12.14□□□□□ -0.47
SF3B1-204ENST00000414963 FGF23Q9GZV9 251 aaPredicted RBP12.14□□□□□ -0.47
SF3B1-204ENST00000414963 NXF2Q9GZY0 626 aaKnown RBP12.14□□□□□ -0.47
SF3B1-204ENST00000414963 FBXO9Q9UK97 447 aaPredicted RBP12.14□□□□□ -0.47
SF3B1-204ENST00000414963 ZDHHC8Q9ULC8 765 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 A3GALT2U3KPV4 340 aa12.14□□□□□ -0.47
SF3B1-204ENST00000414963 USP9YO00507 2555 aaPredicted RBP12.14□□□□□ -0.47
SF3B1-204ENST00000414963 COL12A1Q99715 3063 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.13□□□□□ -0.47
SF3B1-204ENST00000414963 A0A1W2PPR1 153 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 ZSCAN5BA6NJL1 495 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 CTAG2O75638 210 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 NCR1O76036 304 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 PTBP3O95758 552 aaKnown RBP12.13□□□□□ -0.47
SF3B1-204ENST00000414963 HCKP08631 526 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 OCMP0CE72 109 aaPredicted RBP12.13□□□□□ -0.47
SF3B1-204ENST00000414963 COX6B1P14854 86 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 ZNF93P35789 620 aaPredicted RBP12.13□□□□□ -0.47
SF3B1-204ENST00000414963 ZNF81P51508 661 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 ATP1B3P54709 279 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 MTCP1P56278 107 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 GNG3P63215 75 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 MZT1Q08AG7 82 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 OR8G1Q15617 311 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 FBXL14Q8N1E6 418 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 OR6M1Q8NGM8 313 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 FBXW5Q969U6 566 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 SLC25A28Q96A46 364 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 BORCS8Q96FH0 119 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 RNF170Q96K19 258 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 SORCS2Q96PQ0 1159 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 PSMG3-AS1Q96PY0 264 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 DIRC2Q96SL1 478 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 DCUN1D5Q9BTE7 237 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 ADAT1Q9BUB4 502 aaKnown RBP12.13□□□□□ -0.47
SF3B1-204ENST00000414963 MRI1Q9BV20 369 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 RTL8AQ9BWD3 113 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 CXXC4Q9H2H0 198 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 MSL2Q9HCI7 577 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 PTTG2Q9NZH5 202 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 PMF1-BGLAPU3KQ54 211 aa12.13□□□□□ -0.47
SF3B1-204ENST00000414963 A0A075B6Q4 140 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 IGKV1-27A0A075B6S5 117 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 FAM230AA0A1W2PPH8 454 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 SMIM30A4D0T7 59 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 TMEM210A6NLX4 147 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 ZNF732B4DXR9 585 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 H0YL77 283 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 NAT2P11245 290 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 THBS2P35442 1172 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 ALDH3B1P43353 468 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 SCAND1P57086 179 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 TLE4Q04727 773 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 NKPD1Q17RQ9 610 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 DMRTC1Q5HYR2 192 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 ASCL4Q6XD76 172 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 RNF144BQ7Z419 303 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 ZNF573Q86YE8 665 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 MUC15Q8N387 334 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 JAGN1Q8N5M9 183 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 CELF2-AS1Q8N7Q2 184 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 ZNF611Q8N823 705 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 OR8S1Q8NH09 359 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 NPRL2Q8WTW4 380 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 ACOT12Q8WYK0 555 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 AP3S1Q92572 193 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 OR51I2Q9H344 312 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 MS4A5Q9H3V2 200 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 CNTD2Q9H8S5 307 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 FAIMQ9NVQ4 179 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 C14orf119Q9NWQ9 140 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 NKIRAS2Q9NYR9 191 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 STEAP1Q9UHE8 339 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 ROS1P08922 2347 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 ABCA4P78363 2273 aa12.12□□□□□ -0.47
SF3B1-204ENST00000414963 A1L4Q6 167 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 M0R233 179 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 CD55P08174 381 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 DANCRP0C864 163 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 HTR2CP28335 458 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 CD200P41217 278 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 PTGFRP43088 359 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 GPM6AP51674 278 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 CAPZA1P52907 286 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 ZP1P60852 638 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 MAB21L1Q13394 359 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 RAB11BQ15907 218 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 IDNKQ5T6J7 187 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 AGAP6Q5VW22 663 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 DTX2Q86UW9 622 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 SAXO1Q8IYX7 474 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 ZSCAN4Q8NAM6 433 aaPredicted RBP12.11□□□□□ -0.47
SF3B1-204ENST00000414963 OR4D6Q8NGJ1 314 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 TRMT10AQ8TBZ6 339 aaKnown RBP12.11□□□□□ -0.47
SF3B1-204ENST00000414963 GTF3AQ92664 365 aaKnown RBP12.11□□□□□ -0.47
SF3B1-204ENST00000414963 SPACA5Q96QH8 159 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 TLNRD1Q9H1K6 362 aa12.11□□□□□ -0.47
SF3B1-204ENST00000414963 PLGRKTQ9HBL7 147 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms