RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 LINC01387J3KSC0 135 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 PPM1DO15297 605 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 NDUFB6O95139 128 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 KCNJ3P48549 501 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 CLN3Q13286 438 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 TIGITQ495A1 244 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 LINC01555Q8NAE3 123 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 OR2V1Q8NHB1 315 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 IL22RA2Q969J5 263 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 SPACA5Q96QH8 159 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 PYCARD-AS1I3L0S3 204 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 LINC01565O15544 149 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 HSBP1O75506 76 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 POU2F2P09086 479 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 CLDN15P56746 228 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 PPIAP62937 165 aaKnown RBP12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 ARL16Q0P5N6 197 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 ZIC1Q15915 447 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 COX14Q96I36 57 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 GPR87Q9BY21 358 aa12.33□□□□□ -0.44
SMARCA4-202ENST00000413806 ESRP2Q9H6T0 727 aaKnown RBP12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 ADGRL4Q9HBW9 690 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 RAB18Q9NP72 206 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 ZNF891A8MT65 544 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 C2CD4DB7Z1M9 353 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 CLDN34H7C241 214 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 TMEM128Q5BJH2 165 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 CIB3Q96Q77 187 aaPredicted RBP12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 MENTQ9BUN1 341 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 SERTM2A0A1B0GWG4 89 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 LIMS3P0CW19 117 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 LIMS4P0CW20 117 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 ZNF117Q03924 483 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 MAMSTRQ6ZN01 415 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 CARFQ8N187 725 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 K7EQM0 130 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 SIRPB1O00241 398 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 PIGPP57054 158 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 ANKRD16Q6P6B7 361 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 STPG2Q8N412 459 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 CADM4Q8NFZ8 388 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 SARAFQ96BY9 339 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 ORAI1Q96D31 301 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 SCN9AQ15858 1988 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 CROCCQ5TZA2 2017 aa12.32□□□□□ -0.44
SMARCA4-202ENST00000413806 TCRBV16S1A1N1A0A5B0 115 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 EFSO43281 561 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 PRKNO60260 465 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 GPR12P47775 334 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 RAC1P63000 192 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 FUT7Q11130 342 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 ZNF154Q13106 437 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 SLC35E1Q96K37 410 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 EDEM2Q9BV94 578 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 TINAGL1Q9GZM7 467 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 CHST6Q9GZX3 395 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 PPP1R3CQ9UQK1 317 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 MARF1Q9Y4F3 1742 aaKnown RBP12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 FPR2P25090 351 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 OPRM1P35372 400 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 ZNF141Q15928 474 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 Q1RN00 199 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 GPBAR1Q8TDU6 330 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 OR2A5Q96R48 311 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 MS4A7Q9GZW8 240 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 PROCRQ9UNN8 238 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 NPIPB8E9PQR5 432 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 MBTPS2O43462 519 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 SCGB1C2P0DMR2 95 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 SULT1A2P50226 295 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 CD81P60033 236 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 TMEM215Q68D42 235 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 DEGS2Q6QHC5 323 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 SPSB1Q96BD6 273 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 TAAR6Q96RI8 345 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 SLC35B3Q9H1N7 401 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 C20orf141Q9NUB4 165 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 ST3GAL6Q9Y274 331 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 ABCD3P28288 659 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 CDC20BQ86Y33 519 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 RTN4IP1Q8WWV3 396 aaPredicted RBP12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 PELI1Q96FA3 418 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 SHARPINQ9H0F6 387 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 DEFB127Q9H1M4 99 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 GOLT1BQ9Y3E0 138 aa12.31□□□□□ -0.44
SMARCA4-202ENST00000413806 TEX50A0A1B0GTY4 177 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 GSK3AP49840 483 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 ZNF687Q8N1G0 1237 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 NOL4LQ96MY1 436 aaPredicted RBP12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 RCL1Q9Y2P8 373 aaKnown RBP12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 GLRA1P23415 457 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 ETV3LQ6ZN32 361 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 SPICQ8N5J4 248 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 OR10P1Q8NGE3 313 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 ZNF391Q9UJN7 358 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 CTSVO60911 334 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 CRYBA1P05813 215 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 GABRA4P48169 554 aa12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 TIAL1Q01085 375 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMARCA4-202ENST00000413806 WDR38Q5JTN6 314 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms