RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 LPAR5Q9H1C0 372 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 SMDT1Q9H4I9 107 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 RDH14Q9HBH5 336 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 NOX4Q9NPH5 578 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 MARCH2Q9P0N8 246 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 NAT8Q9UHE5 227 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 SIGLEC7Q9Y286 467 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 PAM16Q9Y3D7 125 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 OR51B2Q9Y5P1 312 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 ATG2AQ2TAZ0 1938 aa4.63□□□□□ -1.67
HERC4-205ENST00000412272 FAM72CH0Y354 149 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 HCRTR1O43613 425 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 LRP3O75074 770 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 TRAPPC6AO75865 159 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 PMS2P2O95744 297 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 MAS1P04201 325 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 C1QTNF9P0C862 333 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 TNFRSF1AP19438 455 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 SNCAP37840 140 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 SMIM11AP58511 58 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 TAS2R43P59537 309 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 FAM72AQ5TYM5 149 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 FAM72DQ6L9T8 149 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 MEPCEQ7L2J0 689 aaKnown RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 TMPRSS11BQ86T26 416 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 FAM72BQ86X60 149 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 C20orf196Q8IYI0 205 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 LINC01599Q8WXQ3 324 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 PTH2Q96A98 100 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 ANAPC16Q96DE5 110 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 CHRDL1Q9BU40 450 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 LINC00470Q9BZP3 86 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 FBXW2Q9UKT8 454 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 NUP210LQ5VU65 1888 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 IGKV6-21A0A0C4DH24 114 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 IGHV1-69-2A0A0G2JMI3 117 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 C17orf102A2RUQ5 167 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 NPEPPSL1A6NEC2 478 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 ZNF705FA8MVS1 300 aaPredicted RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 FGF10O15520 208 aaPredicted RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 ZNF705DP0CH99 300 aaPredicted RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 ZNF705BP0CI00 300 aaPredicted RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 ELAVL4P26378 380 aaKnown RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 PRDX4Q13162 271 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 ENDOGQ14249 297 aaKnown RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 EXOSC7Q15024 291 aaKnown RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 GABRA6Q16445 453 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 FCRL6Q6DN72 434 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 NIPAL3Q6P499 406 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 PRSS45Q7RTY3 260 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 ERASQ7Z444 233 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 DEFB106AQ8N104 65 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 OR4D9Q8NGE8 314 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 GALMQ96C23 342 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 GULP1Q9UBP9 304 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 OARD1Q9Y530 152 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 CSDC2Q9Y534 153 aaKnown RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 NME7Q9Y5B8 376 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 B3GALT1Q9Y5Z6 326 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 BPTFQ12830 3046 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 NPIPA5A0A0B4J1W7 369 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 MYADML2A6NDP7 307 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 ZNF860A6NHJ4 632 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 NPIPA5E9PKD4 350 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 NPIPA3F8WFD2 350 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 K7EPK0 472 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 TAX1BP3O14907 124 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 TIAF1O95411 115 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 DUS4LO95620 317 aaKnown RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 SEMA4FO95754 770 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 GBAP04062 536 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 ITGB2P05107 769 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 DBHP09172 617 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 IGLC1P0CG04 106 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 CFHR2P36980 270 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 GLIPR1P48060 266 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 SOX2P48431 317 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 ELOA3BQ3SY89 546 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 CDC42EP5Q6NZY7 148 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 DOLPP1Q86YN1 238 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 FAM71E2Q8N5Q1 922 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 CHST4Q8NCG5 386 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 ELOA3Q8NG57 546 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 CLEC4CQ8WTT0 213 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 CFHR4Q92496 578 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 ACY3Q96HD9 319 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 LMLNQ96KR4 655 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 ZFP3Q96NJ6 502 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 TIMP4Q99727 224 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 PBDC1Q9BVG4 233 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 QTRT1Q9BXR0 403 aaKnown RBP4.62□□□□□ -1.67
HERC4-205ENST00000412272 PIGVQ9NUD9 493 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 BET1LQ9NYM9 111 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 PRSS50Q9UI38 385 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 NPIPA1Q9UND3 350 aa4.62□□□□□ -1.67
HERC4-205ENST00000412272 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.61□□□□□ -1.67
HERC4-205ENST00000412272 IGLC7A0M8Q6 106 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 FEZF1A0PJY2 475 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 FFAR1O14842 300 aa4.61□□□□□ -1.67
HERC4-205ENST00000412272 NME6O75414 186 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms