RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 TFR2Q9UP52 801 aa2.45□□□□□ -2.02
RNU2-28P-201ENST00000410457 SLC7A11Q9UPY5 501 aa2.45□□□□□ -2.02
RNU2-28P-201ENST00000410457 ACOT9Q9Y305 439 aa2.45□□□□□ -2.02
RNU2-28P-201ENST00000410457 SCN1AP35498 2009 aa2.45□□□□□ -2.02
RNU2-28P-201ENST00000410457 TSPOAP1O95153 1857 aa2.45□□□□□ -2.02
RNU2-28P-201ENST00000410457 TRAV8-7A0A075B6U6 113 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 CENPVL3A0A0U1RRI6 287 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 K7ERQ8 282 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 M0QX08 132 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 M0R1B8 84 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 M0R1X1 148 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 PLIN3O60664 434 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 ZMPSTE24O75844 475 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 CCNKO75909 580 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 IGLV3-25P01717 112 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 MUC1P15941 1255 aaPredicted RBP2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 IL1RNP18510 177 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 CASQ1P31415 396 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 PRSS3P35030 304 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 DNASE1L1P49184 302 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 TNNC1P63316 161 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 IFFO1Q0D2I5 559 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 DYNC1I2Q13409 638 aaKnown RBP2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 EIF4EBP1Q13541 118 aaPredicted RBP2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 TOMM34Q15785 309 aaPredicted RBP2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 PSG3Q16557 428 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 CDNFQ49AH0 187 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 ABCA11PQ4W5N1 156 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 EPGNQ6UW88 154 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 Q6ZSR6 202 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 SETD3Q86TU7 594 aaPredicted RBP2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 ING5Q8WYH8 240 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 CDKL2Q92772 493 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 TMIGD2Q96BF3 282 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 RBMXL1Q96E39 390 aaKnown RBP2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 MRPL48Q96GC5 212 aaKnown RBP2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 SNF8Q96H20 258 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 ZBED3Q96IU2 234 aaPredicted RBP2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 SPIN2AQ99865 258 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 RNF5Q99942 180 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 SPIN2BQ9BPZ2 258 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 WDR55Q9H6Y2 383 aaPredicted RBP2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 SIRT7Q9NRC8 400 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 NECAP2Q9NVZ3 263 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 ZNF229Q9UJW7 825 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 AP3M1Q9Y2T2 418 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 LRRC42Q9Y546 428 aa2.44□□□□□ -2.02
RNU2-28P-201ENST00000410457 ZNF608Q9ULD9 1512 aaPredicted RBP2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 IGHV3-49A0A0A0MS15 119 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 IGHV6-1A0A0B4J1U7 121 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 CCL15-CCL14A0A0B4J2E2 113 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 RAB19A4D1S5 217 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 TVP23AA6NH52 213 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 J3QT63 122 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 SC5DO75845 299 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 WISP3O95389 354 aaPredicted RBP2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 IGLV2-8P01709 118 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 ZNF806P0C7X5 589 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 PSMB5P28074 263 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 P2RY2P41231 377 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 GALR1P47211 349 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 KCNJ3P48549 501 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 RGS6P49758 472 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 CDC20Q12834 499 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 MAD2L1BPQ15013 274 aaPredicted RBP2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 CCL15Q16663 113 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 FAHD1Q6P587 224 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 ZNF645Q8N7E2 425 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 CYB561A3Q8NBI2 242 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 NECAP1Q8NC96 275 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 ZNF461Q8TAF7 563 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 NT5CQ8TCD5 201 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 ESR2Q92731 530 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 Q96MT0 163 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 ALS2CR12Q96Q35 445 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 DOK1Q99704 481 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 C20orf144Q9BQM9 153 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 COA1Q9GZY4 146 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 PORCNQ9H237 461 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 PRORYQ9H606 182 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 RMND1Q9NWS8 449 aa2.43□□□□□ -2.02
RNU2-28P-201ENST00000410457 NPHP4O75161 1426 aaPredicted RBP2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 AK9Q5TCS8 1911 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 SVILO95425 2214 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 DYSFO75923 2080 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 IGKV2-28A0A075B6P5 120 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 TRAV8-6A0A0B4J262 113 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 FAM240AA0A1B0GVK7 77 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 CENPBD1B2RD01 187 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 K7EN84 100 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 CCDC22O60826 627 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 IGKV2D-28P01615 120 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 IGKV3-11P04433 115 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 ZNF32P17041 273 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 NPY1RP25929 384 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 PRLHRP49683 370 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 ZNF816Q0VGE8 651 aaPredicted RBP2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 TNXAQ16473 311 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 HHATQ5VTY9 493 aa2.42□□□□□ -2.02
RNU2-28P-201ENST00000410457 OR5T1Q8NG75 326 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms