RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 DUX5Q96PT3 197 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 RAB3IPQ96QF0 476 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 TBX15Q96SF7 602 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 APOL4Q9BPW4 351 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 OSBPL10Q9BXB5 764 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 DNTTIP1Q9H147 329 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 PRDM13Q9H4Q3 707 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 MOB1AQ9H8S9 216 aa16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 WARS2Q9UGM6 360 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 RPUSD1Q9UJJ7 312 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-209ENST00000409543 LOC110117498-PIK3R3F6TDL0 507 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 GPR37O15354 613 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 TTRP02766 147 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 RNASE1P07998 156 aaKnown RBP16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 HKR1P10072 659 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 AMY2BP19961 511 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 TGM4P49221 684 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 GPM6AP51674 278 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 GNG3P63215 75 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 SLC9A3R2Q15599 337 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 BRD3OSQ6XYD6 125 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 FAM216BQ8N7L0 139 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 C3orf56Q8N813 242 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 OR5A2Q8NGI9 324 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 DMRTB1Q96MA1 342 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 SIRPDQ9H106 197 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 WDR13Q9H1Z4 485 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 OR51I2Q9H344 312 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 CNTD2Q9H8S5 307 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 DNAJB11Q9UBS4 358 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 R4GMQ9 66 aa16.22■□□□□ 0.19
TSPAN4-209ENST00000409543 A0A1B0GW55 424 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 OR5B21A6NL26 309 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 ZNF732B4DXR9 585 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 MAGEB4O15481 346 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 AKR7A2O43488 359 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 NDUFB3O43676 98 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 MTRF1O75570 445 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 DUX4L2P0CJ85 424 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 DUX4L3P0CJ86 424 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 DUX4L4P0CJ87 422 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 DUX4L5P0CJ88 424 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 DUX4L6P0CJ89 424 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 DUX4L7P0CJ90 424 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 HTR1FP30939 366 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 PDCD1Q15116 288 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 CEP78Q5JTW2 689 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 DUX4L9Q6RFH8 374 aaPredicted RBP16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 MOB3CQ70IA8 216 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 ELMOD2Q8IZ81 293 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 LY6G5BQ8NDX9 201 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 OR5T2Q8NGG2 359 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 OR51G2Q8NGK0 314 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 OR8J1Q8NGP2 316 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 SLC25A28Q96A46 364 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 RBM4BQ9BQ04 359 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 RIBC2Q9H4K1 309 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 DUX4Q9UBX2 424 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 MRM2Q9UI43 246 aaKnown RBP16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 ENPP5Q9UJA9 477 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 PIGLQ9Y2B2 252 aa16.21■□□□□ 0.19
TSPAN4-209ENST00000409543 CENPVL3A0A0U1RRI6 287 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 SAC3D1A6NKF1 404 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 DHRS3O75911 302 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 OR2T7P0C7T2 308 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 FAHP16930 419 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 GMFBP60983 142 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 ARF6P62330 175 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 FOXL1Q12952 345 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 DEFB112Q30KQ8 113 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 AWAT1Q58HT5 328 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 LRRC10Q5BKY1 277 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 BCL2L15Q5TBC7 163 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 ZNF788Q6ZQV5 615 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 FGFRL1Q8N441 504 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 OR2T27Q8NH04 317 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 PYDC1Q8WXC3 89 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 MED30Q96HR3 178 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 SNTG1Q9NSN8 517 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 OR52A1Q9UKL2 312 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 GTF2A1LQ9UNN4 478 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 SNX5Q9Y5X3 404 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 NBEAL1Q6ZS30 2694 aa16.2■□□□□ 0.18
TSPAN4-209ENST00000409543 MDFIC2A0A1B0GVS7 189 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 NKX6-3A6NJ46 265 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 RHBDL1O75783 438 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 NRASP01111 189 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 IKZF1Q13422 519 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 TMED1Q13445 227 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 CDONQ4KMG0 1287 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 PLCXD3Q63HM9 321 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 ANGPTL6Q8NI99 470 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 ZNF671Q8TAW3 534 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 GATAD2BQ8WXI9 593 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 AQP3Q92482 292 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 ZDHHC16Q969W1 377 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 NOX4Q9NPH5 578 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 NLKQ9UBE8 527 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 KPTNQ9Y664 436 aa16.19■□□□□ 0.18
TSPAN4-209ENST00000409543 V9GYS6 101 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms