RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TOMM5Q8N4H5 51 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 NUP37Q8NFH4 326 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 OR2G2Q8NGZ5 317 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 OTOSQ8NHW6 89 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 SF3B5Q9BWJ5 86 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 COMMD4Q9H0A8 199 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 NARFLQ9H6Q4 476 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 LPAR2Q9HBW0 351 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 TCF7L1Q9HCS4 588 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 ING3Q9NXR8 418 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 FRRS1LQ9P0K9 344 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 IKZF2Q9UKS7 526 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 B9D1Q9UPM9 204 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 ETV7Q9Y603 341 aa10.87□□□□□ -0.67
CHRNA1-205ENST00000409542 TRRAPQ9Y4A5 3859 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 A0A0A6YYJ9 748 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 IGLV1-36A0A0B4J1U3 117 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 C7orf66A4D0T2 115 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 A6NIN4 97 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 FTCDNL1E5RQL4 147 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 PSMD9O00233 223 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 KRT33AO76009 404 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 RPP14O95059 124 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 DHFRP00374 187 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 IGKV3-15P01624 115 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 COL8A2P25067 703 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 ERP29P30040 261 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 CCR9P51686 369 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 RAG2P55895 527 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 UBE2NP61088 152 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 ACTG1P63261 375 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 CD83Q01151 205 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 ZP4Q12836 540 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 KLF9Q13886 244 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 MFSD13AQ14CX5 517 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 ELFN2Q5R3F8 820 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 C1orf229Q6ZS94 237 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 CREB3L2Q70SY1 520 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 LRRTM1Q86UE6 522 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 CMTM4Q8IZR5 234 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 DTX3Q8N9I9 347 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 CLDND2Q8NHS1 167 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 ZNF417Q8TAU3 575 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 RAB40AQ8WXH6 277 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 NSMAFQ92636 917 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 SLC25A38Q96DW6 304 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 C4orf45Q96LM5 186 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 FYTTD1Q96QD9 318 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 OR8B4Q96RC9 309 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 ZNF442Q9H7R0 627 aa10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 RBMX2Q9Y388 322 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-205ENST00000409542 TGP01266 2768 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 IGHV2OR16-5A0A0B4J2B6 119 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 A6NIZ1 184 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 NPIPB13A6NJU9 1138 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 OR6C65A6NJZ3 312 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 NPIPB4C9JG80 1138 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 ZNF587BE7ETH6 402 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 C11orf98E9PRG8 122 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 OR6A2O95222 327 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 AVPP01185 164 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 C1QBP02746 253 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 CD3GP09693 182 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 RAP1BP61224 184 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 RAP1AP62834 184 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 MRPS10P82664 201 aaKnown RBP10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 ROM1Q03395 351 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 C3orf36Q3SXR2 165 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 HES5Q5TA89 166 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 TMEM225Q6GV28 225 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 KRT74Q7RTS7 529 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 DPY19L4Q7Z388 723 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 ABHD12BQ7Z5M8 362 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 PEG10Q86TG7 708 aaKnown RBP10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 KDM8Q8N371 416 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 ZNF454Q8N9F8 522 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 SGMS2Q8NHU3 365 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 GPR148Q8TDV2 347 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 C15orf40Q8WUR7 153 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 GCDHQ92947 438 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 SLC25A36Q96CQ1 311 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 ZNF837Q96EG3 531 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 SLA2Q9H6Q3 261 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 HIF1ANQ9NWT6 349 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 SPEF1Q9Y4P9 236 aa10.85□□□□□ -0.67
CHRNA1-205ENST00000409542 SLC22A23A1A5C7 686 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 CENPBD1B2RD01 187 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 B4DSR2 109 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 GABARAPH6UMI1 98 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 TCRBP04435 133 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 CRABP1P29762 137 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 KIR3DL2P43630 455 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 MAP2K6P52564 334 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 ARF1P84077 181 aaKnown RBP10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 MAB21L1Q13394 359 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 FAM205BPQ63HN1 556 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 SLC18B1Q6NT16 456 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 ZNF676Q8N7Q3 588 aa10.84□□□□□ -0.67
CHRNA1-205ENST00000409542 ASCC1Q8N9N2 400 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms