RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PCGF3Q3KNV8 242 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 CEACAM21Q3KPI0 293 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 Q5PR19 223 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 PLCXD3Q63HM9 321 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 C11orf71Q6IPW1 123 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 Q6ZR03 302 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 MOB3CQ70IA8 216 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 ANKRD13BQ86YJ7 626 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 OR2Z1Q8NG97 314 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 MICU1Q9BPX6 476 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 CHCHD6Q9BRQ6 235 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 TCF7L1Q9HCS4 588 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 C14orf119Q9NWQ9 140 aa14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 TXNL4BQ9NX01 149 aaKnown RBP14.05□□□□□ -0.16
TSPAN4-208ENST00000409531 A0A1W2PPK0 400 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 ZSCAN5BA6NJL1 495 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 OR5B21A6NL26 309 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 MAGEB3O15480 346 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 NAT2P11245 290 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 ATF1P18846 271 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 PRKACBP22694 351 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 MYL9P24844 172 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 CDKN1AP38936 164 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 KRTAP21-3Q3LHN1 58 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 FAM209AQ5JX71 171 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 GPR107Q5VW38 600 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 SATL1Q86VE3 508 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 OR1M1Q8NGA1 313 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 OR5A2Q8NGI9 324 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 OR13C9Q8NGT0 318 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 SPSB1Q96BD6 273 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 ITPKCQ96DU7 683 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 ELMOD3Q96FG2 381 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 CPNE2Q96FN4 548 aaPredicted RBP14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 RTL8AQ9BWD3 113 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 GPR173Q9NS66 373 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 TAS2R4Q9NYW5 299 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 NF1P21359 2839 aa14.04□□□□□ -0.16
TSPAN4-208ENST00000409531 CHD3Q12873 2000 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 MEGF11A6BM72 1044 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 PIN1P1O15428 100 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 MLNRO43193 412 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 SPRY3O43610 288 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 NOL3O60936 208 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 IGHV1-46P01743 117 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 IGFBP3P17936 291 aaPredicted RBP14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 SRMP19623 302 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 CALRP27797 417 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 SRP9P49458 86 aaKnown RBP14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 FUT6P51993 359 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 UBE2V2Q15819 145 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 CEP78Q5JTW2 689 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 FAM27D1Q5T7N8 215 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 C22orf42Q6IC83 251 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 ZNF529Q6P280 563 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 CELF2-AS1Q8N7Q2 184 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 DNAAF1Q8NEP3 725 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 OR10AD1Q8NGE0 317 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 OR5P3Q8WZ94 311 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 KCTD7Q96MP8 289 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 EGLN1Q9GZT9 426 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 RAB1BQ9H0U4 201 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 TMEM138Q9NPI0 162 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 SNTG1Q9NSN8 517 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 IL19Q9UHD0 177 aa14.03□□□□□ -0.16
TSPAN4-208ENST00000409531 TRAV1-2A0A0B4J238 106 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 TMEM210A6NLX4 147 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 H7C417 338 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 CD55P08174 381 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 AZGP1P25311 298 aaKnown RBP14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 BDKRB2P30411 391 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 CD200P41217 278 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 GNG3P63215 75 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 TNFAIP6P98066 277 aaPredicted RBP14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 CLVS1Q8IUQ0 354 aaPredicted RBP14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 NKAIN3Q8N8D7 197 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 RAB2BQ8WUD1 216 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 GTF3AQ92664 365 aaKnown RBP14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 BORCS8Q96FH0 119 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 RNF170Q96K19 258 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 VRK1Q99986 396 aaPredicted RBP14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 BCL7BQ9BQE9 202 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 CACNG6Q9BXT2 260 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 DECR2Q9NUI1 292 aa14.02□□□□□ -0.17
TSPAN4-208ENST00000409531 ACANP16112 2415 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 TRAV8-7A0A075B6U6 113 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 F5H5P2 479 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 H0YL77 283 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 TPD52L2O43399 206 aaKnown RBP14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 GABARAPO95166 117 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 ALDOBP05062 364 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 HCKP08631 526 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 FOSL1P15407 271 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 TNFRSF1AP19438 455 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 RBP2P50120 134 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 ATP1B3P54709 279 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 TMBIM6P55061 237 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 LHFPL2Q6ZUX7 228 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 HPSE2Q8WWQ2 592 aa14.01□□□□□ -0.17
TSPAN4-208ENST00000409531 RPL3LQ92901 407 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms