RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 C11orf91Q3C1V1 193 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 FAM76BQ5HYJ3 339 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 CEP78Q5JTW2 689 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 METTL11BQ5VVY1 283 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 DUX4L9Q6RFH8 374 aaPredicted RBP11.02□□□□□ -0.65
SDF4-203ENST00000403997 MOB3CQ70IA8 216 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 GID4Q8IVV7 300 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 FGFRL1Q8N441 504 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 HPSE2Q8WWQ2 592 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 ITFG2Q969R8 447 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 SLC25A28Q96A46 364 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 C12orf43Q96C57 262 aaKnown RBP11.02□□□□□ -0.65
SDF4-203ENST00000403997 C1orf147Q96MC9 270 aaPredicted RBP11.02□□□□□ -0.65
SDF4-203ENST00000403997 WDR13Q9H1Z4 485 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 RIBC2Q9H4K1 309 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 CNTD2Q9H8S5 307 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 ZMAT3Q9HA38 289 aaKnown RBP11.02□□□□□ -0.65
SDF4-203ENST00000403997 SNTG1Q9NSN8 517 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 DUX4Q9UBX2 424 aa11.02□□□□□ -0.65
SDF4-203ENST00000403997 NUFIP1Q9UHK0 495 aaKnown RBP11.02□□□□□ -0.65
SDF4-203ENST00000403997 MDFIC2A0A1B0GVS7 189 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 SAC3D1A6NKF1 404 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 NDUFB3O43676 98 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 MTRF1O75570 445 aaKnown RBP11.01□□□□□ -0.65
SDF4-203ENST00000403997 TTRP02766 147 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 IKZF1Q13422 519 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 SLC9A3R2Q15599 337 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 DEFB112Q30KQ8 113 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 CEACAM21Q3KPI0 293 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 AWAT1Q58HT5 328 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 LRRC10Q5BKY1 277 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 DMRTC1Q5HYR2 192 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 RUSC1-AS1Q66K80 236 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 STUMQ69YW2 141 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 FAM216BQ8N7L0 139 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 OR5A2Q8NGI9 324 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 OR51G2Q8NGK0 314 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 ZNF671Q8TAW3 534 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 PYDC1Q8WXC3 89 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 TBX15Q96SF7 602 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 TBX5Q99593 518 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 CLN6Q9NWW5 311 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 WARS2Q9UGM6 360 aaKnown RBP11.01□□□□□ -0.65
SDF4-203ENST00000403997 RPUSD1Q9UJJ7 312 aaKnown RBP11.01□□□□□ -0.65
SDF4-203ENST00000403997 PIGLQ9Y2B2 252 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 R4GMQ9 66 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 ANK2Q01484 3957 aa11.01□□□□□ -0.65
SDF4-203ENST00000403997 NKX6-3A6NJ46 265 aa11□□□□□ -0.65
SDF4-203ENST00000403997 RHBDL1O75783 438 aa11□□□□□ -0.65
SDF4-203ENST00000403997 DHRS3O75911 302 aa11□□□□□ -0.65
SDF4-203ENST00000403997 NRASP01111 189 aa11□□□□□ -0.65
SDF4-203ENST00000403997 IGLV3-1P01715 115 aa11□□□□□ -0.65
SDF4-203ENST00000403997 HKR1P10072 659 aa11□□□□□ -0.65
SDF4-203ENST00000403997 MMP9P14780 707 aa11□□□□□ -0.65
SDF4-203ENST00000403997 FAHP16930 419 aa11□□□□□ -0.65
SDF4-203ENST00000403997 AMY2BP19961 511 aa11□□□□□ -0.65
SDF4-203ENST00000403997 ATP6V1E1P36543 226 aa11□□□□□ -0.65
SDF4-203ENST00000403997 GABRA2P47869 451 aa11□□□□□ -0.65
SDF4-203ENST00000403997 TGM4P49221 684 aa11□□□□□ -0.65
SDF4-203ENST00000403997 EGR3Q06889 387 aa11□□□□□ -0.65
SDF4-203ENST00000403997 FOXL1Q12952 345 aa11□□□□□ -0.65
SDF4-203ENST00000403997 PDCD1Q15116 288 aa11□□□□□ -0.65
SDF4-203ENST00000403997 BCL2L15Q5TBC7 163 aa11□□□□□ -0.65
SDF4-203ENST00000403997 ATPAF1Q5TC12 328 aaPredicted RBP11□□□□□ -0.65
SDF4-203ENST00000403997 PLCXD3Q63HM9 321 aa11□□□□□ -0.65
SDF4-203ENST00000403997 PLEKHG7Q6ZR37 379 aa11□□□□□ -0.65
SDF4-203ENST00000403997 ASRGL1Q7L266 308 aa11□□□□□ -0.65
SDF4-203ENST00000403997 KRT74Q7RTS7 529 aa11□□□□□ -0.65
SDF4-203ENST00000403997 GATAD2BQ8WXI9 593 aa11□□□□□ -0.65
SDF4-203ENST00000403997 LHX4Q969G2 390 aa11□□□□□ -0.65
SDF4-203ENST00000403997 MED30Q96HR3 178 aa11□□□□□ -0.65
SDF4-203ENST00000403997 RAB3IPQ96QF0 476 aaPredicted RBP11□□□□□ -0.65
SDF4-203ENST00000403997 RBM4BQ9BQ04 359 aaKnown RBP11□□□□□ -0.65
SDF4-203ENST00000403997 OSBPL10Q9BXB5 764 aa11□□□□□ -0.65
SDF4-203ENST00000403997 SIRPDQ9H106 197 aa11□□□□□ -0.65
SDF4-203ENST00000403997 OR51I2Q9H344 312 aa11□□□□□ -0.65
SDF4-203ENST00000403997 ONECUT1Q9UBC0 465 aa11□□□□□ -0.65
SDF4-203ENST00000403997 MRM2Q9UI43 246 aaKnown RBP11□□□□□ -0.65
SDF4-203ENST00000403997 ENPP5Q9UJA9 477 aa11□□□□□ -0.65
SDF4-203ENST00000403997 OR52A1Q9UKL2 312 aa11□□□□□ -0.65
SDF4-203ENST00000403997 CENPVL3A0A0U1RRI6 287 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 A0A1W2PQL4 384 aaPredicted RBP10.99□□□□□ -0.65
SDF4-203ENST00000403997 OR5B21A6NL26 309 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 CLDN34H7C241 214 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 GPR37O15354 613 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 HOXA3O43365 443 aaPredicted RBP10.99□□□□□ -0.65
SDF4-203ENST00000403997 SRSF10O75494 262 aaKnown RBP10.99□□□□□ -0.65
SDF4-203ENST00000403997 RPP14O95059 124 aaKnown RBP10.99□□□□□ -0.65
SDF4-203ENST00000403997 APOL3O95236 402 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 TFF1P04155 84 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 KRT8P05787 483 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 RNASE1P07998 156 aaKnown RBP10.99□□□□□ -0.65
SDF4-203ENST00000403997 SELLP14151 372 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 GLRA1P23415 457 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 HTR1FP30939 366 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 ZNF684Q5T5D7 378 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 ZBTB37Q5TC79 503 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 C16orf87Q6PH81 154 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 CCDC121Q6ZUS5 278 aa10.99□□□□□ -0.65
SDF4-203ENST00000403997 SSX6Q7RTT6 188 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms