RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 OCMP0CE72 109 aaPredicted RBP28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 IGFBP3P17936 291 aaPredicted RBP28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 RAB3AP20336 220 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 CD200P41217 278 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 CNN3Q15417 329 aaKnown RBP28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 HSD17B12Q53GQ0 312 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 C22orf42Q6IC83 251 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 WDR86Q86TI4 376 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 TECTBQ96PL2 329 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 FUNDC2Q9BWH2 189 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 SAP30LQ9HAJ7 183 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 C14orf119Q9NWQ9 140 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 SSR3Q9UNL2 185 aa28.21■■■□□ 2.11
CSNK1E-204ENST00000403904 FAM230AA0A1W2PPH8 454 aa28.2■■■□□ 2.11
CSNK1E-204ENST00000403904 ZNF732B4DXR9 585 aa28.2■■■□□ 2.11
CSNK1E-204ENST00000403904 LY6HO94772 140 aa28.2■■■□□ 2.11
CSNK1E-204ENST00000403904 FSTP19883 344 aa28.2■■■□□ 2.11
CSNK1E-204ENST00000403904 GALP22466 123 aa28.2■■■□□ 2.11
CSNK1E-204ENST00000403904 AZGP1P25311 298 aaKnown RBP28.2■■■□□ 2.11
CSNK1E-204ENST00000403904 SRP9P49458 86 aaKnown RBP28.2■■■□□ 2.11
CSNK1E-204ENST00000403904 RPL3LQ92901 407 aaKnown RBP28.2■■■□□ 2.11
CSNK1E-204ENST00000403904 EGLN1Q9GZT9 426 aa28.2■■■□□ 2.11
CSNK1E-204ENST00000403904 TXNL4BQ9NX01 149 aaKnown RBP28.2■■■□□ 2.11
CSNK1E-204ENST00000403904 LOC100506127A0A0U1RQW1 187 aa28.2■■■□□ 2.1
CSNK1E-204ENST00000403904 GRPP07492 148 aa28.2■■■□□ 2.1
CSNK1E-204ENST00000403904 DNASE1P24855 282 aa28.2■■■□□ 2.1
CSNK1E-204ENST00000403904 CALRP27797 417 aaKnown RBP28.2■■■□□ 2.1
CSNK1E-204ENST00000403904 PPP3R1P63098 170 aa28.2■■■□□ 2.1
CSNK1E-204ENST00000403904 PRAMEF6Q5VXH4 476 aa28.2■■■□□ 2.1
CSNK1E-204ENST00000403904 PHYHIPQ92561 330 aa28.2■■■□□ 2.1
CSNK1E-204ENST00000403904 OR5B21A6NL26 309 aa28.19■■■□□ 2.1
CSNK1E-204ENST00000403904 GNG3P63215 75 aa28.19■■■□□ 2.1
CSNK1E-204ENST00000403904 MZT1Q08AG7 82 aa28.19■■■□□ 2.1
CSNK1E-204ENST00000403904 NEU4Q8WWR8 484 aaPredicted RBP28.19■■■□□ 2.1
CSNK1E-204ENST00000403904 ZNF701Q9NV72 531 aaPredicted RBP28.19■■■□□ 2.1
CSNK1E-204ENST00000403904 FOXJ3Q9UPW0 622 aa28.19■■■□□ 2.1
CSNK1E-204ENST00000403904 CSMD1Q96PZ7 3565 aa28.19■■■□□ 2.1
CSNK1E-204ENST00000403904 ARID1AO14497 2285 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 ARL6IP5O75915 188 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 ALX3O95076 343 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 SRMP19623 302 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 FGF9P31371 208 aaPredicted RBP28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 FUT6P51993 359 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 TESK1Q15569 626 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 MPPED2Q15777 294 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 SATL1Q86VE3 508 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 CELF2-AS1Q8N7Q2 184 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 BORCS8Q96FH0 119 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 SPACA5Q96QH8 159 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 TCF7L1Q9HCS4 588 aa28.18■■■□□ 2.1
CSNK1E-204ENST00000403904 PQLC2LA1A4F0 135 aa28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 MAS1P04201 325 aa28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 HCKP08631 526 aa28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 PRKACBP22694 351 aa28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 ZNF154Q13106 437 aa28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 HNRNPA0Q13151 305 aaKnown RBP28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 SPSB1Q96BD6 273 aa28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 UFSP2Q9NUQ7 469 aa28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 TREM2Q9NZC2 230 aa28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 NAV2Q8IVL1 2488 aa28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 PDZD2O15018 2839 aa28.17■■■□□ 2.1
CSNK1E-204ENST00000403904 IGKV1-27A0A075B6S5 117 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 AIREO43918 545 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 TNFRSF1AP19438 455 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 TIMM50Q3ZCQ8 353 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 FAM76BQ5HYJ3 339 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 GPR107Q5VW38 600 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 RNF144BQ7Z419 303 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 PERPQ96FX8 193 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 CENPOQ9BU64 300 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 RNF167Q9H6Y7 350 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 TMEM138Q9NPI0 162 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 DYSFO75923 2080 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 CDC14BO60729 498 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 F12P00748 615 aaPredicted RBP28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 IGHV4-39P01824 125 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 BDKRB2P30411 391 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 RBMXP38159 391 aaKnown RBP28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 EFNA4P52798 201 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 MOGAT3Q86VF5 341 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 DNAAF1Q8NEP3 725 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 OR52N4Q8NGI2 321 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 GCM1Q9NP62 436 aa28.16■■■□□ 2.1
CSNK1E-204ENST00000403904 TMEM210A6NLX4 147 aa28.15■■■□□ 2.1
CSNK1E-204ENST00000403904 PTBP3O95758 552 aaKnown RBP28.15■■■□□ 2.1
CSNK1E-204ENST00000403904 PTH2RP49190 550 aa28.15■■■□□ 2.1
CSNK1E-204ENST00000403904 RBP2P50120 134 aa28.15■■■□□ 2.1
CSNK1E-204ENST00000403904 MTCP1P56278 107 aa28.15■■■□□ 2.1
CSNK1E-204ENST00000403904 LSM3P62310 102 aaKnown RBP28.15■■■□□ 2.1
CSNK1E-204ENST00000403904 TGIF2LYQ8IUE0 185 aa28.15■■■□□ 2.1
CSNK1E-204ENST00000403904 NAA50Q9GZZ1 169 aaKnown RBP28.15■■■□□ 2.1
CSNK1E-204ENST00000403904 OR51I2Q9H344 312 aa28.15■■■□□ 2.1
CSNK1E-204ENST00000403904 GSTK1Q9Y2Q3 226 aa28.15■■■□□ 2.1
CSNK1E-204ENST00000403904 LYNX1G3V0Z9 82 aa28.14■■■□□ 2.1
CSNK1E-204ENST00000403904 MAGEB3O15480 346 aa28.14■■■□□ 2.1
CSNK1E-204ENST00000403904 LYNX1P0DP58 116 aa28.14■■■□□ 2.1
CSNK1E-204ENST00000403904 PAX1P15863 534 aa28.14■■■□□ 2.1
CSNK1E-204ENST00000403904 GATA4P43694 442 aa28.14■■■□□ 2.1
CSNK1E-204ENST00000403904 ATP5J2P56134 94 aa28.14■■■□□ 2.1
CSNK1E-204ENST00000403904 LHFPL2Q6ZUX7 228 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms