RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FAM3AP98173 230 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 HSF1Q00613 529 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 TTLL10Q6ZVT0 673 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 EMG1Q92979 244 aaKnown RBP12.33□□□□□ -0.44
APOB-202ENST00000399256 TCTN2Q96GX1 697 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 SCRT1Q9BWW7 348 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 GPR84Q9NQS5 396 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 ZNF701Q9NV72 531 aaPredicted RBP12.33□□□□□ -0.44
APOB-202ENST00000399256 TRIOBPQ9H2D6 2365 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 LRP4O75096 1905 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 ZNF878C9JN71 531 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 YKT6O15498 198 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 YIF1AO95070 293 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 EFNA3P52797 238 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 BIDP55957 195 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 STARD6P59095 220 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 CHRFAM7AQ494W8 412 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 OR2B11Q5JQS5 317 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 OR10A2Q9H208 303 aa12.33□□□□□ -0.44
APOB-202ENST00000399256 NOSIPQ9Y314 301 aaKnown RBP12.33□□□□□ -0.44
APOB-202ENST00000399256 TMEM265A0A087WTH1 108 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 A0A1W2PQD3 144 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 TAS2R46P59540 309 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 TLE3Q04726 772 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 GGNBP1Q5YKI7 109 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 OR8B12Q8NGG6 310 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 DAZLQ92904 295 aaKnown RBP12.32□□□□□ -0.44
APOB-202ENST00000399256 WDR77Q9BQA1 342 aaPredicted RBP12.32□□□□□ -0.44
APOB-202ENST00000399256 URM1Q9BTM9 101 aaKnown RBP12.32□□□□□ -0.44
APOB-202ENST00000399256 GGACTQ9BVM4 153 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 TMPRSS5Q9H3S3 457 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 ZNF319Q9P2F9 582 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 IGKV1D-8A0A087WSZ0 117 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 PRH1P02810 166 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 HPNP05981 417 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 PMELP40967 661 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 GFERP55789 205 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 ZNF239Q16600 458 aaKnown RBP12.32□□□□□ -0.44
APOB-202ENST00000399256 SMRP1Q8NCR6 262 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 SEMA6DQ8NFY4 1073 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 RHBDD1Q8TEB9 315 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 SH3BGRL3Q9H299 93 aa12.32□□□□□ -0.44
APOB-202ENST00000399256 SHISA8B8ZZ34 492 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 GIMD1P0DJR0 217 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 BLVRBP30043 206 aaPredicted RBP12.31□□□□□ -0.44
APOB-202ENST00000399256 CDAP32320 146 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 RAB2AP61019 212 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 C16orf47Q6ZP98 133 aaPredicted RBP12.31□□□□□ -0.44
APOB-202ENST00000399256 H1FNTQ75WM6 255 aaPredicted RBP12.31□□□□□ -0.44
APOB-202ENST00000399256 C1QL2Q7Z5L3 287 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 TGM7Q96PF1 710 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 WWTR1Q9GZV5 400 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 DUSP15Q9H1R2 295 aaPredicted RBP12.31□□□□□ -0.44
APOB-202ENST00000399256 WFDC1Q9HC57 220 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 GON4LQ3T8J9 2241 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 MASP2O00187 686 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 IGFBP4P22692 258 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 RABIFP47224 123 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 ZNF121P58317 390 aaPredicted RBP12.31□□□□□ -0.44
APOB-202ENST00000399256 RPUSD3Q6P087 351 aaKnown RBP12.31□□□□□ -0.44
APOB-202ENST00000399256 UBAC2Q8NBM4 344 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 ZNF2Q9BSG1 426 aaPredicted RBP12.31□□□□□ -0.44
APOB-202ENST00000399256 KCNJ16Q9NPI9 418 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 C19orf12Q9NSK7 152 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 VDAC3Q9Y277 283 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 PUS1Q9Y606 427 aaKnown RBP eCLIP12.31□□□□□ -0.44
APOB-202ENST00000399256 IGHV5-51A0A0C4DH38 117 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 H3BML4 177 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 XRCC2O43543 280 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 GATCO43716 136 aaKnown RBP12.31□□□□□ -0.44
APOB-202ENST00000399256 DANCRP0C864 163 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 GABRA4P48169 554 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 SULF2Q8IWU5 870 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 OR1J1Q8NGS3 322 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 GNRHR2Q96P88 292 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 PFDN5Q99471 154 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 TOLLIPQ9H0E2 274 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 LUZP4Q9P127 313 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 COLQQ9Y215 455 aaPredicted RBP12.31□□□□□ -0.44
APOB-202ENST00000399256 LHFPL6Q9Y693 200 aa12.31□□□□□ -0.44
APOB-202ENST00000399256 DIRAS3O95661 229 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 IFNA21P01568 189 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 SERPINA2P20848 420 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 HTR5AP47898 357 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 HSD11B2P80365 405 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 SP6Q3SY56 376 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 CDPF1Q6NVV7 123 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 SGPP2Q8IWX5 399 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 TMEM156Q8N614 296 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 HSD17B11Q8NBQ5 300 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 IGKV1-9A0A0C4DH69 117 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 WRBO00258 174 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 OR2C1O95371 312 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 IFNA17P01571 189 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 ZNF17P17021 662 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 ITGA3P26006 1051 aa12.3□□□□□ -0.44
APOB-202ENST00000399256 RPS10P46783 165 aaKnown RBP12.3□□□□□ -0.44
APOB-202ENST00000399256 KIAA0141Q14154 515 aaPredicted RBP12.3□□□□□ -0.44
APOB-202ENST00000399256 HDHD3Q9BSH5 251 aaPredicted RBP12.3□□□□□ -0.44
APOB-202ENST00000399256 PECRQ9BY49 303 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms