RNA–Protein interactions for RNA: ENST00000399050.8

CTNND1-205, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-205ENST00000399050 FCER1GP30273 86 aa7.75□□□□□ -1.17
CTNND1-205ENST00000399050 HAAOP46952 286 aa7.75□□□□□ -1.17
CTNND1-205ENST00000399050 COTL1Q14019 142 aa7.75□□□□□ -1.17
CTNND1-205ENST00000399050 GTF2H5Q6ZYL4 71 aa7.75□□□□□ -1.17
CTNND1-205ENST00000399050 SLC25A26Q70HW3 274 aa7.75□□□□□ -1.17
CTNND1-205ENST00000399050 ZDHHC23Q8IYP9 409 aa7.75□□□□□ -1.17
CTNND1-205ENST00000399050 TSPAN32Q96QS1 320 aa7.75□□□□□ -1.17
CTNND1-205ENST00000399050 CNTD2Q9H8S5 307 aa7.75□□□□□ -1.17
CTNND1-205ENST00000399050 CA10Q9NS85 328 aa7.75□□□□□ -1.17
CTNND1-205ENST00000399050 SIRT3Q9NTG7 399 aaPredicted RBP7.75□□□□□ -1.17
CTNND1-205ENST00000399050 DNAJB12Q9NXW2 375 aaKnown RBP7.75□□□□□ -1.17
CTNND1-205ENST00000399050 TMED3Q9Y3Q3 217 aa7.75□□□□□ -1.17
CTNND1-205ENST00000399050 RBFOX3A6NFN3 312 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 NRG2O14511 850 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 CDC14BO60729 498 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 IGHA1P01876 353 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 OR3A4PP47883 348 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 ERVS71-1P61550 626 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 YBX1P67809 324 aaKnown RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 ZNF573Q86YE8 665 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 H1FXQ92522 213 aaKnown RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 APH1AQ96BI3 265 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 MMP25Q9NPA2 562 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 FAM24AA6NFZ4 105 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 ZNF737O75373 536 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 VAMP5O95183 116 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 DEFA4P12838 97 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 CDKN2AP42771 156 aaKnown RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 SUB1P53999 127 aaKnown RBP eCLIP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 TMEM33P57088 247 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 EXT1Q16394 746 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 UBE3DQ7Z6J8 389 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 ZNF683Q8IZ20 524 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 OR5M9Q8NGP3 310 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 PHOSPHO2Q8TCD6 241 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 NAT6Q93015 286 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 MUCL1Q96DR8 90 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 IGHV3-64DA0A0J9YX35 117 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 FFAR4Q5NUL3 377 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 PRR27Q6MZM9 219 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 PWWP2BQ6NUJ5 590 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 DYNLRB1Q9NP97 96 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 DUSP13Q9UII6 198 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 ARID1BQ8NFD5 2236 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 OR2W5A6NFC9 320 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 M0R143 59 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 ADAP1O75689 374 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 NTN1O95631 604 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 MMP7P09237 267 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 HLA-DRB3P79483 266 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 IL13RA2Q14627 380 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 DCAF12Q5T6F0 453 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 RGP1Q92546 391 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 IL22RA2Q969J5 263 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 PACRGQ96M98 296 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 GPR87Q9BY21 358 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 LYRM2Q9NU23 88 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 FBXO34Q9NWN3 711 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 LINC01553A4QN01 128 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 SELEP16581 610 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 FUT6P51993 359 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 PTTG1IPP53801 180 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 PNLIPRP2P54317 469 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 FGF8P55075 233 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 LPAL2Q16609 132 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 FAM109BQ6ICB4 259 aaPredicted RBP7.74□□□□□ -1.17
CTNND1-205ENST00000399050 MRGPREQ86SM8 312 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 MRGPRX4Q96LA9 322 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 TECTBQ96PL2 329 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 POLDIP2Q9Y2S7 368 aa7.74□□□□□ -1.17
CTNND1-205ENST00000399050 TRBV5-3A0A0A0MS03 114 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 C3orf85A0A1B0GTC6 90 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 NKX6-3A6NJ46 265 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 J3QR89 54 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 CEACAM5P06731 702 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 OR5AC1P0C628 307 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 CXCL2P19875 107 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 USF1P22415 310 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-205ENST00000399050 FOXF1Q12946 379 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 C21orf62-AS1Q17RA5 79 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 OVCH2Q7RTZ1 564 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 C17orf78Q8N4C9 275 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 AGBL5Q8NDL9 886 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 ZNRF4Q8WWF5 429 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 PINX1Q96BK5 328 aaKnown RBP7.73□□□□□ -1.17
CTNND1-205ENST00000399050 WDR34Q96EX3 536 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 MEGF10Q96KG7 1140 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 NAA60Q9H7X0 242 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 CCL27Q9Y4X3 112 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 MIA3Q5JRA6 1907 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 ZNF891A8MT65 544 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-205ENST00000399050 ABCD4O14678 606 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 TUSC1Q2TAM9 212 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 SCCPDHQ8NBX0 429 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 C6orf106Q9H6K1 298 aaPredicted RBP7.73□□□□□ -1.17
CTNND1-205ENST00000399050 A0A096LPE4 126 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 A0A1W2PPZ6 126 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 TM4SF4P48230 202 aa7.73□□□□□ -1.17
CTNND1-205ENST00000399050 GZMMP51124 257 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms