RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 FUT6P51993 359 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TNFAIP6P98066 277 aaPredicted RBP16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 SPRNQ5BIV9 151 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 WDR86Q86TI4 376 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 LRRTM1Q86UE6 522 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 CELF2-AS1Q8N7Q2 184 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 DNAAF1Q8NEP3 725 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 NPRL2Q8WTW4 380 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 RNF170Q96K19 258 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 MEGF10Q96KG7 1140 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 SORCS2Q96PQ0 1159 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 OR2V2Q96R30 315 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 VRK1Q99986 396 aaPredicted RBP16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 RAB1BQ9H0U4 201 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 GSTK1Q9Y2Q3 226 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 AKAP6Q13023 2319 aa16.51■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TRAV1-2A0A0B4J238 106 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 LOC100289279A0A1B0GTE1 492 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 SHISA3A0PJX4 238 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TMEM210A6NLX4 147 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 ZNF732B4DXR9 585 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 NCR1O76036 304 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 ALDOBP05062 364 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 BDKRB2P30411 391 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 SRP9P49458 86 aaKnown RBP16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 GPM6AP51674 278 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 GNG3P63215 75 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TESK1Q15569 626 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 FAM76BQ5HYJ3 339 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 CLVS1Q8IUQ0 354 aaPredicted RBP16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TRMT10AQ8TBZ6 339 aaKnown RBP16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 ITLN1Q8WWA0 313 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 CXorf56Q9H5V9 222 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 RNF167Q9H6Y7 350 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 NEK6Q9HC98 313 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TCF7L1Q9HCS4 588 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TMEM138Q9NPI0 162 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 SNTG1Q9NSN8 517 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 C14orf119Q9NWQ9 140 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 UNC79Q9P2D8 2635 aa16.5■□□□□ 0.23
MAP1LC3A-203ENST00000397709 IGKV1-27A0A075B6S5 117 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TACC2O95359 2948 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 MAS1P04201 325 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 ADRA2CP18825 462 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 GATA4P43694 442 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 CCL8P80075 99 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 CTF1Q16619 201 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 CRIP3Q6Q6R5 217 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 LHFPL2Q6ZUX7 228 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 OR52N4Q8NGI2 321 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 NEU4Q8WWR8 484 aaPredicted RBP16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 BORCS8Q96FH0 119 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 KCTD7Q96MP8 289 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 EGLN1Q9GZT9 426 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 SLITRK2Q9H156 845 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 DECR2Q9NUI1 292 aa16.49■□□□□ 0.23
MAP1LC3A-203ENST00000397709 APCP25054 2843 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 FAM230AA0A1W2PPH8 454 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 ERCC1P07992 297 aaPredicted RBP16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 HCKP08631 526 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 OCMP0CE72 109 aaPredicted RBP16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 PAX1P15863 534 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 MYL9P24844 172 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 RBP2P50120 134 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 LSM3P62310 102 aaKnown RBP16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 ZNF154Q13106 437 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 PRAMEF6Q5VXH4 476 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 RNF144BQ7Z419 303 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 NKAIN3Q8N8D7 197 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TLNRD1Q9H1K6 362 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 OR51I2Q9H344 312 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 SAP30LQ9HAJ7 183 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 ZNF701Q9NV72 531 aaPredicted RBP16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 PLEKHA6Q9Y2H5 1048 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 CEPT1Q9Y6K0 416 aa16.48■□□□□ 0.23
MAP1LC3A-203ENST00000397709 ABCA12Q86UK0 2595 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 LRP5LA4QPB2 252 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 MEGF11A6BM72 1044 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 MAGEB3O15480 346 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 HPXP02790 462 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TNFRSF1AP19438 455 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TGFBR1P36897 503 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 MTNR1BP49286 362 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 ATP1B3P54709 279 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TMBIM6P55061 237 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 DDI2Q5TDH0 399 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 LYPD6Q86Y78 171 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 C11orf53Q8IXP5 236 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 LURAP1Q96LR2 239 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 SPACA5Q96QH8 159 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 GFI1Q99684 422 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 BCL7BQ9BQE9 202 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 RBM38Q9H0Z9 239 aaKnown RBP16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 EDARQ9UNE0 448 aa16.47■□□□□ 0.23
MAP1LC3A-203ENST00000397709 CHD3Q12873 2000 aaKnown RBP16.46■□□□□ 0.23
MAP1LC3A-203ENST00000397709 IGHV3-64DA0A0J9YX35 117 aa16.46■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TRIM64BA6NI03 449 aa16.46■□□□□ 0.23
MAP1LC3A-203ENST00000397709 TPD52L2O43399 206 aaKnown RBP16.46■□□□□ 0.23
MAP1LC3A-203ENST00000397709 GRPP07492 148 aa16.46■□□□□ 0.23
MAP1LC3A-203ENST00000397709 CD37P11049 281 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms