RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 SLC22A25Q6T423 547 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 DVL3Q92997 716 aaPredicted RBP17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 EXTL2Q9UBQ6 330 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 TMEM272A0A1B0GTI8 110 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 FABP12A6NFH5 140 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 ART1P52961 327 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 TMEM255AQ5JRV8 349 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 GLIPR1L1Q6UWM5 242 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 FAM131AQ6UXB0 335 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 NUP37Q8NFH4 326 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 SYNPRQ8TBG9 265 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 HPSE2Q8WWQ2 592 aa17.48■□□□□ 0.39
VCPKMT-202ENST00000395860 IGKV1-27A0A075B6S5 117 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 BPNT1O95861 308 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 PTGFRP43088 359 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 NCMAPQ5T1S8 102 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 CMTM4Q8IZR5 234 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 OR5A2Q8NGI9 324 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 TNFAIP8L1Q8WVP5 186 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 ITPKCQ96DU7 683 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 SLC25A38Q96DW6 304 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 PLPPR2Q96GM1 343 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 S100A13Q99584 98 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 CYSLTR2Q9NS75 346 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 MYEF2Q9P2K5 600 aaKnown RBP17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 V9GYH0 126 aa17.47■□□□□ 0.39
VCPKMT-202ENST00000395860 J3QRK9 145 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 ZNF250P15622 560 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 MMP15P51511 669 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 GPM6AP51674 278 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 MADCAM1Q13477 382 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 OR8G5Q8NG78 346 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 OR4M1Q8NGD0 313 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 OR8S1Q8NH09 359 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 TMEM171Q8WVE6 324 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 OR5P3Q8WZ94 311 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 RNF170Q96K19 258 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 RHBDL2Q9NX52 303 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 DUSP13Q9UII6 198 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 ING4Q9UNL4 249 aa17.46■□□□□ 0.39
VCPKMT-202ENST00000395860 UBBP0CG47 229 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 PLA2G7Q13093 441 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 MSMPQ1L6U9 139 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 METAP1DQ6UB28 335 aaPredicted RBP17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 RAB40AQ8WXH6 277 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 S100A16Q96FQ6 103 aaKnown RBP17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 ADAT1Q9BUB4 502 aaKnown RBP17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 ABCG5Q9H222 651 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 TMEM100Q9NV29 134 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 POU2F3Q9UKI9 436 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 ATP23Q9Y6H3 246 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 EPG5Q9HCE0 2579 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 PQLC2LA1A4F0 135 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 ZNF732B4DXR9 585 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 PLATP00750 562 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 TMEM225BP0DP42 221 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 PPP5CP53041 499 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 KLF3P57682 345 aaPredicted RBP17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 ZP1P60852 638 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 IL18Q14116 193 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 OR10K2Q6IF99 312 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 ADAM5Q6NVV9 412 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 DTX3Q8N9I9 347 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 BORCS5Q969J3 196 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 FGF23Q9GZV9 251 aaPredicted RBP17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 NPDC1Q9NQX5 325 aaPredicted RBP17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 CA10Q9NS85 328 aa17.45■□□□□ 0.38
VCPKMT-202ENST00000395860 RELNP78509 3460 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 OR5B21A6NL26 309 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 LDLRAD4O15165 306 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 SPRY1O43609 319 aaPredicted RBP17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 CD3EP07766 207 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 VSIG8P0DPA2 414 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 CD40LGP29965 261 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 EFNB2P52799 333 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 C1QL2Q7Z5L3 287 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 LRP11Q86VZ4 500 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 ZFAND2BQ8WV99 257 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 MICU1Q9BPX6 476 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 RTL8AQ9BWD3 113 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 GHRLQ9UBU3 117 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 NOP16Q9Y3C1 178 aaKnown RBP17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 CADP27708 2225 aa17.44■□□□□ 0.38
VCPKMT-202ENST00000395860 IGHV3-13P01766 116 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 NAT2P11245 290 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 ALDH3B1P43353 468 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 SELENOVP59797 346 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 GNG3P63215 75 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 OR8G1Q15617 311 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 ZNF79Q15937 498 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 FAM46BQ96A09 425 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 PTX4Q96A99 478 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 C1orf147Q96MC9 270 aaPredicted RBP17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 SYT3Q9BQG1 590 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 SLC22A4Q9H015 551 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 ELL3Q9HB65 397 aaPredicted RBP17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 RAB22AQ9UL26 194 aa17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 SMG1Q96Q15 3661 aaKnown RBP17.43■□□□□ 0.38
VCPKMT-202ENST00000395860 RAB6AP20340 208 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms