RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 FCER1GP30273 86 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 TGFBR1P36897 503 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 UBALD1Q8TB05 177 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 SPSB1Q96BD6 273 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 NKX6-2Q9C056 277 aaPredicted RBP9.3□□□□□ -0.92
COL4A6-203ENST00000394872 OR51I2Q9H344 312 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 UBTD1Q9HAC8 227 aa9.3□□□□□ -0.92
COL4A6-203ENST00000394872 TXNDC12O95881 172 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 SLC25A4P12235 298 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 PPP1CBP62140 327 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 C16orf47Q6ZP98 133 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-203ENST00000394872 LINC01555Q8NAE3 123 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 GABRG3Q99928 467 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 UBE2L5PA0A1B0GUS4 154 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 PDGFAP04085 211 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 NTF3P20783 257 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 PMP22Q01453 160 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 PABPC1L2AQ5JQF8 200 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 LYG1Q8N1E2 194 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 ZNF485Q8NCK3 441 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 OR13D1Q8NGV5 346 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 TMEM56Q96MV1 263 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 GPR31O00270 319 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 SBK3P0C264 359 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 CCL2P13500 99 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 FAM109BQ6ICB4 259 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-203ENST00000394872 BHLHA15Q7RTS1 189 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-203ENST00000394872 AMMECR1Q9Y4X0 333 aaPredicted RBP9.29□□□□□ -0.92
COL4A6-203ENST00000394872 PEX11BO96011 259 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 CD3EP07766 207 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 ZNF32P17041 273 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 GABRB1P18505 474 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 AMER3Q8N944 861 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 DNAJB12Q9NXW2 375 aaKnown RBP9.29□□□□□ -0.92
COL4A6-203ENST00000394872 TRAV1-2A0A0B4J238 106 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 RER1O15258 196 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 AQP8O94778 261 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 SRD5A2P31213 254 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 GALNSP34059 522 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 EVX1P49640 407 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 PPP1CAP62136 330 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 ENDOGQ14249 297 aaKnown RBP9.29□□□□□ -0.92
COL4A6-203ENST00000394872 SLC25A35Q3KQZ1 300 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 TMEM229BQ8NBD8 167 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 LRRC29Q8WV35 223 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 OR2A5Q96R48 311 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 OR2J3O76001 311 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 SULT1A3P0DMM9 295 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 SULT1A4P0DMN0 295 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 S100A4P26447 101 aaKnown RBP9.29□□□□□ -0.92
COL4A6-203ENST00000394872 DCTDP32321 178 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 GPNMBQ14956 572 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 APOBEC4Q8WW27 367 aaKnown RBP9.29□□□□□ -0.92
COL4A6-203ENST00000394872 CMBLQ96DG6 245 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 ADGRG7Q96K78 797 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 SLC25A32Q9H2D1 315 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 TMEM231Q9H6L2 316 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 RNF24Q9Y225 148 aa9.29□□□□□ -0.92
COL4A6-203ENST00000394872 ARID1BQ8NFD5 2236 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-203ENST00000394872 PRSS44E7EML9 344 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 IL5P05113 134 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 ASCL1P50553 236 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 PRRX1P54821 245 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 GUCA2AQ02747 115 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 TMEM65Q6PI78 240 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 UBE3DQ7Z6J8 389 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 SFTPA1Q8IWL2 248 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 OR5AP2Q8NGF4 316 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 DERL3Q96Q80 235 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 AAMDCQ9H7C9 122 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 GAR1Q9NY12 217 aaKnown RBP9.28□□□□□ -0.92
COL4A6-203ENST00000394872 PAPPAQ13219 1627 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 MEX3AA1L020 520 aaKnown RBP9.28□□□□□ -0.92
COL4A6-203ENST00000394872 EPXP11678 715 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 CD80P33681 288 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 OPRK1P41145 380 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 OR3A4PP47883 348 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 PDZD11Q5EBL8 140 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 CARFQ8N187 725 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 GAL3ST2Q9H3Q3 398 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 GABRA1P14867 456 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 SLC25A1P53007 311 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 H3F3AP84243 136 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 IGFBP7Q16270 282 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 NKG7Q16617 165 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 B3GNTL1Q67FW5 361 aaPredicted RBP9.28□□□□□ -0.92
COL4A6-203ENST00000394872 ADAM5Q6NVV9 412 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 RXFP4Q8TDU9 374 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 GPR87Q9BY21 358 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 PRRC2BQ5JSZ5 2229 aaKnown RBP9.28□□□□□ -0.92
COL4A6-203ENST00000394872 IGLV3-16A0A075B6K0 115 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 KCNE1BA0A087WTH5 132 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 TRAPPC2P0DI81 140 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 TRAPPC2BP0DI82 140 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 SSBP1Q04837 148 aaKnown RBP9.28□□□□□ -0.92
COL4A6-203ENST00000394872 SIGLEC14Q08ET2 396 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 OR4C16Q8NGL9 310 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 CTDSP1Q9GZU7 261 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 FBXO8Q9NRD0 319 aa9.28□□□□□ -0.92
COL4A6-203ENST00000394872 ARL2-SNX15V9GYD0 113 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms