RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 OR1L3Q8NH93 324 aa11.74□□□□□ -0.53
NFKB1-202ENST00000394820 ZNF524Q96C55 264 aa11.74□□□□□ -0.53
NFKB1-202ENST00000394820 OR2C1O95371 312 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 CD27P26842 260 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 CX3CR1P49238 355 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 CCR5P51681 352 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 GABREP78334 506 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 RHEBQ15382 184 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 SHEQ5VZ18 495 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 UNQ9370/PRO34162Q6UXP9 181 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 PIK3IP1Q96FE7 263 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 NELFAQ9H3P2 528 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 PIGLQ9Y2B2 252 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 B3GALT5Q9Y2C3 310 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 WIF1Q9Y5W5 379 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 FLVCR1Q9Y5Y0 555 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 HLA-HP01893 362 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 PPICP45877 212 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 TMEM33P57088 247 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 HSD11B2P80365 405 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 BATFQ16520 125 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 SGCBQ16585 318 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 H1FNTQ75WM6 255 aaPredicted RBP11.73□□□□□ -0.53
NFKB1-202ENST00000394820 VASH2Q86V25 355 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 GPR137CQ8N3F9 429 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 GLYATL2Q8WU03 294 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 RRNAD1Q96FB5 475 aaKnown RBP11.73□□□□□ -0.53
NFKB1-202ENST00000394820 SLC46A1Q96NT5 459 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 FAAP24Q9BTP7 215 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 FAM212BQ9NTI7 297 aaPredicted RBP11.73□□□□□ -0.53
NFKB1-202ENST00000394820 COL6A3P12111 3177 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 RNF222A6NCQ9 220 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 LINC01387J3KSC0 135 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 ATXN7O15265 892 aaPredicted RBP11.73□□□□□ -0.53
NFKB1-202ENST00000394820 ZNF217O75362 1048 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 ALDH3B1P43353 468 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 LPAR6P43657 344 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 DAP3P51398 398 aaKnown RBP11.73□□□□□ -0.53
NFKB1-202ENST00000394820 FOXF1Q12946 379 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 AKR1C8PQ5T2L2 129 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 UBAC2Q8NBM4 344 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 HPSE2Q8WWQ2 592 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 SLCO5A1Q9H2Y9 848 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 LUZP4Q9P127 313 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 MTCH2Q9Y6C9 303 aa11.73□□□□□ -0.53
NFKB1-202ENST00000394820 APC2O95996 2303 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 FRYQ5TBA9 3013 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 MUC3AQ02505 3323 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 CD37P11049 281 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 PIGPP57054 158 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 SLC30A7Q8NEW0 376 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 OR56B1Q8NGI3 324 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 HAS2Q92819 552 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 PAPOLGQ9BWT3 736 aaKnown RBP11.72□□□□□ -0.53
NFKB1-202ENST00000394820 POLE3Q9NRF9 147 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 RIF1Q5UIP0 2472 aaKnown RBP11.72□□□□□ -0.53
NFKB1-202ENST00000394820 SPTBN1Q01082 2364 aaKnown RBP11.72□□□□□ -0.53
NFKB1-202ENST00000394820 SNAPC5O75971 98 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 BMP5P22003 454 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 RFC3P40938 356 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 IL10RAQ13651 578 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 TESK1Q15569 626 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 ZNF141Q15928 474 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 LCN15Q6UWW0 184 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 ZNF695Q8IW36 515 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 OR6S1Q8NH40 331 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 LRFN1Q9P244 771 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 NPTNQ9Y639 398 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 RALGAPA1Q6GYQ0 2036 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 IGKV1D-43A0A0B4J1Z2 117 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 C7orf77A4D0Y5 90 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 RAD51DO75771 328 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 SCAF4O95104 1147 aaKnown RBP11.72□□□□□ -0.53
NFKB1-202ENST00000394820 PTAFRP25105 342 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 SLC25A1P53007 311 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 NKX6-1P78426 367 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-202ENST00000394820 PCK2Q16822 640 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 HIST2H3PS2Q5TEC6 136 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 OR10D4PQ8NGN7 298 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 OR2G3Q8NGZ4 309 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 MARVELD3Q96A59 401 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 DDIT4LQ96D03 193 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 BORCS8Q96FH0 119 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 ZNF845Q96IR2 970 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-202ENST00000394820 NAA11Q9BSU3 229 aaPredicted RBP11.72□□□□□ -0.53
NFKB1-202ENST00000394820 KCNS2Q9ULS6 477 aa11.72□□□□□ -0.53
NFKB1-202ENST00000394820 ZNF724A8MTY0 619 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 EFSO43281 561 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 DUX1O43812 170 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 IFNA2P01563 188 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 IFNA17P01571 189 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 SKP2Q13309 424 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 GUK1Q16774 197 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 RPUSD3Q6P087 351 aaKnown RBP11.71□□□□□ -0.53
NFKB1-202ENST00000394820 LPCAT3Q6P1A2 487 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 SYT13Q7L8C5 426 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 OR51H1Q8NH63 302 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 MRPL24Q96A35 216 aaKnown RBP11.71□□□□□ -0.53
NFKB1-202ENST00000394820 FAM131CQ96AQ9 280 aa11.71□□□□□ -0.53
NFKB1-202ENST00000394820 DUSP15Q9H1R2 295 aaPredicted RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms