RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 CLEC1BQ9P126 229 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 IGHV1OR15-9A0A0B4J2B8 117 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 RNF222A6NCQ9 220 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 ADAM10O14672 748 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 SPTBN2O15020 2390 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 DNAJC13O75165 2243 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 JTBO76095 146 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 CRYBA1P05813 215 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 IGLV3-21P80748 117 aaPredicted RBP14.28□□□□□ -0.12
PCDH1-203ENST00000394536 UNC119Q13432 240 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 LDLRAD3Q86YD5 345 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 MSGN1A6NI15 193 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 PIAS2O75928 621 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 SPINK2P20155 84 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 AFF3P51826 1226 aaKnown RBP14.28□□□□□ -0.12
PCDH1-203ENST00000394536 TMEM182Q6ZP80 229 aaPredicted RBP14.28□□□□□ -0.12
PCDH1-203ENST00000394536 MCEMP1Q8IX19 187 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 OR52H1Q8NGJ2 320 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 MRGPRX4Q96LA9 322 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 LPAR5Q9H1C0 372 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 FBXL17Q9UF56 701 aa14.28□□□□□ -0.12
PCDH1-203ENST00000394536 CNOT1A5YKK6 2376 aaKnown RBP14.28□□□□□ -0.12
PCDH1-203ENST00000394536 LIPT2A6NK58 231 aa14.27□□□□□ -0.12
PCDH1-203ENST00000394536 CNOT4O95628 575 aaKnown RBP14.27□□□□□ -0.12
PCDH1-203ENST00000394536 SLC25A4P12235 298 aa14.27□□□□□ -0.12
PCDH1-203ENST00000394536 YRDCQ86U90 279 aaKnown RBP14.27□□□□□ -0.12
PCDH1-203ENST00000394536 RTN4RL2Q86UN3 420 aa14.27□□□□□ -0.12
PCDH1-203ENST00000394536 FBXO17Q96EF6 278 aa14.27□□□□□ -0.12
PCDH1-203ENST00000394536 OXGR1Q96P68 337 aa14.27□□□□□ -0.12
PCDH1-203ENST00000394536 DMRTA2Q96SC8 542 aa14.27□□□□□ -0.12
PCDH1-203ENST00000394536 RAB18Q9NP72 206 aa14.27□□□□□ -0.12
PCDH1-203ENST00000394536 MMP26Q9NRE1 261 aa14.27□□□□□ -0.12
PCDH1-203ENST00000394536 AMDHD2Q9Y303 409 aa14.27□□□□□ -0.12
PCDH1-203ENST00000394536 SPP1P10451 314 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 FPR2P25090 351 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 TMEM33P57088 247 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 DHODHQ02127 395 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 TCEAL6Q6IPX3 200 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 SLC22A25Q6T423 547 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 TFAP2EQ6VUC0 442 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 ARHGEF39Q8N4T4 335 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 ZSCAN4Q8NAM6 433 aaPredicted RBP14.27□□□□□ -0.13
PCDH1-203ENST00000394536 KIRREL1Q96J84 757 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 DOCK7Q96N67 2140 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 ARPC4-TTLL3A0A0A6YYG9 625 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 IGKV3-11P04433 115 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 PNLIPP16233 465 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 GLB1P16278 677 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 TUBG1P23258 451 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 ZNF345Q14585 488 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 ZNF674Q2M3X9 581 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 C1orf100Q5SVJ3 147 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 BHLHE23Q8NDY6 225 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 AKR7LQ8NHP1 331 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 LIPHQ8WWY8 451 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 OR10C1Q96KK4 312 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 SGCZQ96LD1 299 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 ZNF285Q96NJ3 590 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 KIAA1671Q9BY89 1806 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 CACNA1GO43497 2377 aa14.27□□□□□ -0.13
PCDH1-203ENST00000394536 A0A1W2PQD3 144 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 ZNF98A6NK75 572 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 GLULP15104 373 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 RHEBQ15382 184 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 MIDNQ504T8 468 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 DRAM2Q6UX65 266 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 ZNF813Q6ZN06 617 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 SLC16A14Q7RTX9 510 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 BIVMQ86UB2 503 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 AQP3Q92482 292 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 PRRX2Q99811 253 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 MOB1AQ9H8S9 216 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 COL4A3Q01955 1670 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 P04436 131 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 EFNA3P52797 238 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 F2RL1P55085 397 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 AKR1C8PQ5T2L2 129 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 Q7L0L9 218 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 ZNF286AQ9HBT8 521 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 MED9Q9NWA0 146 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 WBP1LQ9NX94 342 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 LPAR3Q9UBY5 353 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 ICE1Q9Y2F5 2266 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 UMAD1C9J7I0 102 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 MSX1P28360 303 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 ECH1Q13011 328 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 OR2A2Q6IF42 318 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 SLC16A13Q7RTY0 426 aa14.26□□□□□ -0.13
PCDH1-203ENST00000394536 ALKBH3Q96Q83 286 aaPredicted RBP14.26□□□□□ -0.13
PCDH1-203ENST00000394536 PAPOLGQ9BWT3 736 aaKnown RBP14.26□□□□□ -0.13
PCDH1-203ENST00000394536 OR6C65A6NJZ3 312 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 DNASE2O00115 360 aaPredicted RBP14.25□□□□□ -0.13
PCDH1-203ENST00000394536 ACTL6AO96019 429 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 CD37P11049 281 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 FSTP19883 344 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 GPR157Q5UAW9 335 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 FDX2Q6P4F2 183 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 AAED1Q7RTV5 226 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 CCDC71LQ8N9Z2 235 aa14.25□□□□□ -0.13
PCDH1-203ENST00000394536 TCTEX1D2Q8WW35 142 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms