RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 AHSA1O95433 338 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 MT-ATP6P00846 226 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 P2RY4P51582 365 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 GUK1Q16774 197 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 GUSBP11Q6P575 273 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 HOGA1Q86XE5 327 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 LINC00346Q8IVM7 164 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 TERB2Q8NHR7 220 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 SGK3Q96BR1 496 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 C14orf144Q96I85 54 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 ABHD6Q9BV23 337 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 UFSP2Q9NUQ7 469 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 MED29Q9NX70 200 aa15.62■□□□□ 0.09
SQSTM1-202ENST00000389805 H3BML4 177 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 SDCBPO00560 298 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 GDF9O60383 454 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 DMRTC1Q5HYR2 192 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 UNQ6494/PRO21346Q6UXR6 183 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 PNLDC1Q8NA58 520 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 PLPP5Q8NEB5 264 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 FGGYQ96C11 551 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 OR5B2Q96R09 309 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 AKIRIN1Q9H9L7 192 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 PARP11Q9NR21 331 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 FBXL17Q9UF56 701 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 ZNF107Q9UII5 783 aaPredicted RBP15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 PUS1Q9Y606 427 aaKnown RBP eCLIP15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 MS4A18H0YCH9 400 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 HKR1P10072 659 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 GLRA1P23415 457 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 ITGA3P26006 1051 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 SUPT4H1P63272 117 aaKnown RBP15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 MS4A18Q3C1V0 323 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 TEX30Q5JUR7 227 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 PHF19Q5T6S3 580 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 SPEM1Q8N4L4 309 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 MAFIPQ8WZ33 124 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 PCED1AQ9H1Q7 454 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 SEMA5BQ9P283 1151 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 RAB22AQ9UL26 194 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 HHLA2Q9UM44 414 aa15.61■□□□□ 0.09
SQSTM1-202ENST00000389805 SFT2D2O95562 160 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 S100A2P29034 98 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 WDR74Q6RFH5 385 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 CATSPERDQ86XM0 798 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 ARRDC1Q8N5I2 433 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 OR10D4PQ8NGN7 298 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 EMC6Q9BV81 110 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 SLC26A1Q9H2B4 701 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 PRO1933Q9H354 126 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 SLC5A6Q9Y289 635 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 KNG1P01042 644 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 IFNA17P01571 189 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 HEXBP07686 556 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 FOXK1P85037 733 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 ANKRD37Q7Z713 158 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 SLC39A7Q92504 469 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 TGIF2Q9GZN2 237 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 RTTNQ86VV8 2226 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 FTCDNL1E5RQL4 147 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 VSIG8P0DPA2 414 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 NDUFB7P17568 137 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 SPEM2Q0P670 501 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 ZNF239Q16600 458 aaKnown RBP15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 NKAIN1Q4KMZ8 207 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 NSUN5P2Q63ZY6 315 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 RHBDD2Q6NTF9 364 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 OR9K2Q8NGE7 335 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 THRSPQ92748 146 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 RAB18Q9NP72 206 aa15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 VSX1Q9NZR4 365 aaPredicted RBP15.6■□□□□ 0.09
SQSTM1-202ENST00000389805 ZNF727A8MUV8 499 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 SCGB1D2O95969 90 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 RPL12P30050 165 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 FCGR2CP31995 323 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 CEBPGP53567 150 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 TAS2R31P59538 309 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 FDX2Q6P4F2 183 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 ZNF101Q8IZC7 436 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 NFAM1Q8NET5 270 aaPredicted RBP15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 GTF3AQ92664 365 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 C2orf50Q96LR7 162 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 GPR132Q9UNW8 380 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 LSM5Q9Y4Y9 91 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 A0A0A6YYH2 397 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 A0A1W2PQM1 296 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 A6NJ64 397 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 SNCAP37840 140 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 EIF5AP63241 154 aaKnown RBP15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 ZNF124Q15973 351 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 CENPMQ9NSP4 180 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 URGCP-MRPS24S4R325 110 aa15.59■□□□□ 0.09
SQSTM1-202ENST00000389805 TRBV11-1A0A0K0K1C0 115 aa15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 MEGF11A6BM72 1044 aa15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 K7EPK0 472 aa15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 K7ESF4 209 aa15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 OR2C1O95371 312 aa15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 HOXA5P20719 270 aa15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 TMEM33P57088 247 aa15.58■□□□□ 0.09
SQSTM1-202ENST00000389805 GFI1BQ5VTD9 330 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms