RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 AKR1C8PQ5T2L2 129 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 SPNS3Q6ZMD2 512 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 SLC43A2Q8N370 569 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 ZNF321PQ8N8H1 164 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 AQP3Q92482 292 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 ADAT3Q96EY9 351 aaPredicted RBP12.26□□□□□ -0.45
SDC1-202ENST00000381150 TPSD1Q9BZJ3 242 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 PARPBPQ9NWS1 579 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 SLC5A6Q9Y289 635 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 CDRT15L2A8MXV6 281 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 H3BMH7 237 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 NXPH3O95157 252 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 IFNA21P01568 189 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 FOLR2P14207 255 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 SNU13P55769 128 aaKnown RBP12.26□□□□□ -0.45
SDC1-202ENST00000381150 INSM1Q01101 510 aaPredicted RBP12.26□□□□□ -0.45
SDC1-202ENST00000381150 CHAF1BQ13112 559 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 BTNL8Q6UX41 500 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 ABHD12BQ7Z5M8 362 aaPredicted RBP12.26□□□□□ -0.45
SDC1-202ENST00000381150 OR51E1Q8TCB6 317 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 TMEM230Q96A57 120 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 C14orf144Q96I85 54 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 C5orf34Q96MH7 638 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 SOX7Q9BT81 388 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 MED29Q9NX70 200 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 LUZP4Q9P127 313 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 ST8SIA5O15466 376 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 MELTFP08582 738 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 HTR5AP47898 357 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 GFERP55789 205 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 HSD17B7P56937 341 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 TLE1Q04724 770 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.26□□□□□ -0.45
SDC1-202ENST00000381150 TSPO2Q5TGU0 170 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 FNDC7Q5VTL7 733 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 PLXDC2Q6UX71 529 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 DEFB119Q8N690 84 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 SUMF1Q8NBK3 374 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 ZNF248Q8NDW4 579 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 OR51T1Q8NGJ9 327 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 OR52N5Q8NH56 324 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 ZDHHC8Q9ULC8 765 aa12.26□□□□□ -0.45
SDC1-202ENST00000381150 FRYQ5TBA9 3013 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 LILRA5A6NI73 299 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 CLDN4O14493 209 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 IGHV2-5P01817 119 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 CSNK1EP49674 416 aaKnown RBP12.25□□□□□ -0.45
SDC1-202ENST00000381150 RHEBQ15382 184 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 CLEC12BQ2HXU8 276 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 ATG4DQ86TL0 474 aaPredicted RBP12.25□□□□□ -0.45
SDC1-202ENST00000381150 ZFP62Q8NB50 900 aaPredicted RBP12.25□□□□□ -0.45
SDC1-202ENST00000381150 SLC26A1Q9H2B4 701 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 MRPS28Q9Y2Q9 187 aaKnown RBP12.25□□□□□ -0.45
SDC1-202ENST00000381150 JTBO76095 146 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 TRGC2P03986 189 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 GALNSP34059 522 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 OR3A4PP47883 348 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 SSTP61278 116 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 FAM166AQ6J272 317 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 HOGA1Q86XE5 327 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 ADAMTS18Q8TE60 1221 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 THRSPQ92748 146 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 RAB18Q9NP72 206 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 UNC13CQ8NB66 2214 aa12.25□□□□□ -0.45
SDC1-202ENST00000381150 PRRC2CQ9Y520 2896 aaKnown RBP12.24□□□□□ -0.45
SDC1-202ENST00000381150 A0A1B0GTQ1 180 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 TSTD3H0UI37 97 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 AHSA1O95433 338 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 ASAH2BP0C7U1 165 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 P2RY4P51582 365 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 OR2T2Q6IF00 324 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 GKN2Q86XP6 184 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 AQP10Q96PS8 301 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 ATG101Q9BSB4 218 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 TMEM59Q9BXS4 323 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 CHRNA10Q9GZZ6 450 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 PARP11Q9NR21 331 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 LANCL2Q9NS86 450 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 TUBG1P23258 451 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 CHATP28329 748 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 CD38P28907 300 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 CARD17Q5XLA6 110 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 CATSPERDQ86XM0 798 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 SLC22A24Q8N4F4 322 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 PTPMT1Q8WUK0 201 aaPredicted RBP12.24□□□□□ -0.45
SDC1-202ENST00000381150 THOC3Q96J01 351 aaKnown RBP12.24□□□□□ -0.45
SDC1-202ENST00000381150 TBL1XR1Q9BZK7 514 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 NXF5Q9H1B4 397 aaKnown RBP12.24□□□□□ -0.45
SDC1-202ENST00000381150 MYOZ1Q9NP98 299 aaPredicted RBP12.24□□□□□ -0.45
SDC1-202ENST00000381150 UBQLN4Q9NRR5 601 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 C19orf12Q9NSK7 152 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 CABIN1Q9Y6J0 2220 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 TGIF2-C20orf24A0A0A6YYL0 155 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 C17orf105B2RV13 164 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 H0YL77 283 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 CYTIPO60759 359 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 UTS2O95399 124 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 SRFP11831 508 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 ZNF708P17019 499 aa12.24□□□□□ -0.45
SDC1-202ENST00000381150 HLA-GP17693 338 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms