RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 COX15Q7KZN9 410 aa12.23□□□□□ -0.45
SF1-205ENST00000377394 REC114Q7Z4M0 266 aa12.23□□□□□ -0.45
SF1-205ENST00000377394 RTN4RL2Q86UN3 420 aa12.23□□□□□ -0.45
SF1-205ENST00000377394 PLXDC1Q8IUK5 500 aa12.23□□□□□ -0.45
SF1-205ENST00000377394 ZDHHC22Q8N966 263 aa12.23□□□□□ -0.45
SF1-205ENST00000377394 CHST4Q8NCG5 386 aa12.23□□□□□ -0.45
SF1-205ENST00000377394 EMC6Q9BV81 110 aa12.23□□□□□ -0.45
SF1-205ENST00000377394 PBOV1Q9GZY1 135 aa12.23□□□□□ -0.45
SF1-205ENST00000377394 KLHL13Q9P2N7 655 aa12.23□□□□□ -0.45
SF1-205ENST00000377394 STK17BO94768 372 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 S100A2P29034 98 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 GNALP38405 381 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 CLDN6P56747 220 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 C17orf67Q0P5P2 114 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 GFI1BQ5VTD9 330 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 SLC22A24Q8N4F4 322 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 APCDD1LQ8NCL9 501 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 ZNF501Q96CX3 271 aaPredicted RBP12.22□□□□□ -0.45
SF1-205ENST00000377394 SUCNR1Q9BXA5 334 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 PISDQ9UG56 409 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 VDAC3Q9Y277 283 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 BTBD17A6NE02 478 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 LIPT2A6NK58 231 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 SHISA8B8ZZ34 492 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 SYT7O43581 403 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 FOSL2P15408 326 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 GNB3P16520 340 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 RPS10P46783 165 aaKnown RBP12.22□□□□□ -0.45
SF1-205ENST00000377394 EIF1AXP47813 144 aaKnown RBP12.22□□□□□ -0.45
SF1-205ENST00000377394 CDX1P47902 265 aaPredicted RBP12.22□□□□□ -0.45
SF1-205ENST00000377394 FOXF1Q12946 379 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 CLEC9AQ6UXN8 241 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 ZNF574Q6ZN55 896 aaPredicted RBP12.22□□□□□ -0.45
SF1-205ENST00000377394 RNF144BQ7Z419 303 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 FOXRED2Q8IWF2 684 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 THAP3Q8WTV1 239 aaPredicted RBP12.22□□□□□ -0.45
SF1-205ENST00000377394 TAF9BQ9HBM6 251 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 GAR1Q9NY12 217 aaKnown RBP12.22□□□□□ -0.45
SF1-205ENST00000377394 B3GAT1Q9P2W7 334 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 ZDHHC8Q9ULC8 765 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 SLC5A6Q9Y289 635 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 MMP24Q9Y5R2 645 aa12.22□□□□□ -0.45
SF1-205ENST00000377394 EFNA2O43921 213 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 PIAS2O75928 621 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 MYF5P13349 255 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 HRH1P35367 487 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 SLC6A9P48067 706 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 BIDP55957 195 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 LMAN1LQ9HAT1 526 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 DOK5Q9P104 306 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 A0A087X0M5 115 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 A0A1B0GX30 115 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 DUX1O43812 170 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 HIST1H1BP16401 226 aaKnown RBP12.21□□□□□ -0.45
SF1-205ENST00000377394 DDTP30046 118 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 OR2A2Q6IF42 318 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 UBAC2Q8NBM4 344 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 NFAM1Q8NET5 270 aaPredicted RBP12.21□□□□□ -0.45
SF1-205ENST00000377394 OR13C9Q8NGT0 318 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 DDIT4LQ96D03 193 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 C5orf34Q96MH7 638 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 MRPL13Q9BYD1 178 aaKnown RBP12.21□□□□□ -0.45
SF1-205ENST00000377394 TUBA4BQ9H853 241 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 FGF21Q9NSA1 209 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 PPP4R1LQ9P1A2 415 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 FBLN5Q9UBX5 448 aa12.21□□□□□ -0.45
SF1-205ENST00000377394 TMEM14DPA8MWL7 114 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 IFNA17P01571 189 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 SUMO3P55854 103 aaPredicted RBP12.2□□□□□ -0.46
SF1-205ENST00000377394 LSM6P62312 80 aaKnown RBP12.2□□□□□ -0.46
SF1-205ENST00000377394 CHAF1BQ13112 559 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 RSU1Q15404 277 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 SLC9A3R2Q15599 337 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 FAHD2BQ6P2I3 314 aaPredicted RBP12.2□□□□□ -0.46
SF1-205ENST00000377394 KLHL24Q6TFL4 600 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 SPNS3Q6ZMD2 512 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 TGIF2LXQ8IUE1 241 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 OR56B1Q8NGI3 324 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 MARCH1Q8TCQ1 289 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 CPNE4Q96A23 557 aaPredicted RBP12.2□□□□□ -0.46
SF1-205ENST00000377394 FAHD2AQ96GK7 314 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 LURAP1Q96LR2 239 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 TMEM68Q96MH6 324 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 SLC5A7Q9GZV3 580 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 SERINC1Q9NRX5 453 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 H3BML4 177 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 ETV2O00321 342 aaPredicted RBP12.2□□□□□ -0.46
SF1-205ENST00000377394 DUS4LO95620 317 aaKnown RBP12.2□□□□□ -0.46
SF1-205ENST00000377394 PI3P19957 117 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 SPCS3P61009 180 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 PTCRAQ6ISU1 281 aaPredicted RBP12.2□□□□□ -0.46
SF1-205ENST00000377394 DTWD2Q8NBA8 298 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 OR5D14Q8NGL3 314 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 STT3BQ8TCJ2 826 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 CD300LFQ8TDQ1 290 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 MALSU1Q96EH3 234 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 JSRP1Q96MG2 331 aaPredicted RBP12.2□□□□□ -0.46
SF1-205ENST00000377394 OR5B2Q96R09 309 aa12.2□□□□□ -0.46
SF1-205ENST00000377394 NUDT16L1Q9BRJ7 211 aaKnown RBP12.2□□□□□ -0.46
SF1-205ENST00000377394 NUDT22Q9BRQ3 303 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms