RNA–Protein interactions for RNA: ENST00000377153.5

UBE4B-203, Transcript of ubiquitination factor E4B, humanhuman

TSL 3 BASIC

Gene UBE4B, Length 1,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-203ENST00000377153 ZMYND11Q15326 602 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 Q6ZSR3 168 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 KRT74Q7RTS7 529 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 LURAP1LQ8IV03 231 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 BOLLQ8N9W6 283 aaKnown RBP12.21□□□□□ -0.45
UBE4B-203ENST00000377153 HPSE2Q8WWQ2 592 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 GATAD2BQ8WXI9 593 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 SMR3AQ99954 134 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 ZNF665Q9H7R5 613 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 NEK6Q9HC98 313 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 GPR173Q9NS66 373 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 FKBP14Q9NWM8 211 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 DCAF16Q9NXF7 216 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 BABAM2Q9NXR7 383 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 DHDHQ9UQ10 334 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 PPIAL4AQ9Y536 164 aa12.21□□□□□ -0.45
UBE4B-203ENST00000377153 AKAP9Q99996 3911 aa12.21□□□□□ -0.46
UBE4B-203ENST00000377153 ZNF732B4DXR9 585 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 E9PI62 339 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 CDIPTO14735 213 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 RGS10O43665 173 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 LY6G6DO95868 133 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 CD2P06729 351 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 IGHV4-31P0DP07 118 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 C21orf33P30042 268 aaPredicted RBP12.2□□□□□ -0.46
UBE4B-203ENST00000377153 THBS2P35442 1172 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 RBM48Q5RL73 367 aaKnown RBP12.2□□□□□ -0.46
UBE4B-203ENST00000377153 TMEM42Q69YG0 159 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 NLRC3Q7RTR2 1065 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 WDR86Q86TI4 376 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 RDH10Q8IZV5 341 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 LRRC29Q8WV35 223 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 RNF166Q96A37 237 aaPredicted RBP12.2□□□□□ -0.46
UBE4B-203ENST00000377153 SMIM19Q96E16 107 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 CCDC90BQ9GZT6 254 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 TLNRD1Q9H1K6 362 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 PPP1R3EQ9H7J1 279 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 CLEC2DQ9UHP7 191 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 PCDHGB5Q9Y5G0 923 aa12.2□□□□□ -0.46
UBE4B-203ENST00000377153 TRAV38-1A0A0B4J264 116 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 A6NIN4 97 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 B4DSR2 109 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 FSTL3O95633 263 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 IGHV2-5P01817 119 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 RPS2P15880 293 aaKnown RBP12.19□□□□□ -0.46
UBE4B-203ENST00000377153 PCMT1P22061 227 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 EEF1B2P24534 225 aaKnown RBP12.19□□□□□ -0.46
UBE4B-203ENST00000377153 IL2RGP31785 369 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 GTF2A1P52655 376 aaPredicted RBP12.19□□□□□ -0.46
UBE4B-203ENST00000377153 SLC35A2P78381 396 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 FAM166AQ6J272 317 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 WDR82Q6UXN9 313 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 ZNF826PQ6ZT77 177 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 LRRC28Q86X40 367 aaPredicted RBP12.19□□□□□ -0.46
UBE4B-203ENST00000377153 ZNF573Q86YE8 665 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 LINC01356Q8N9X3 169 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 SCCPDHQ8NBX0 429 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 OR10Z1Q8NGY1 313 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 TRMT10AQ8TBZ6 339 aaKnown RBP12.19□□□□□ -0.46
UBE4B-203ENST00000377153 GPR148Q8TDV2 347 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 RPL3LQ92901 407 aaKnown RBP12.19□□□□□ -0.46
UBE4B-203ENST00000377153 BORCS8Q96FH0 119 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 PDCD1LG2Q9BQ51 273 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 CDCA4Q9BXL8 241 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 GSX1Q9H4S2 264 aaPredicted RBP12.19□□□□□ -0.46
UBE4B-203ENST00000377153 ERVK-18Q9QC07 812 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 POLDIP2Q9Y2S7 368 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 ABCA2Q9BZC7 2435 aa12.19□□□□□ -0.46
UBE4B-203ENST00000377153 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.19□□□□□ -0.46
UBE4B-203ENST00000377153 FAM230AA0A1W2PPH8 454 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 OOEPA6NGQ2 149 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 LGALS8O00214 317 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 WNT9BO14905 357 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 ZNF205O95201 554 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 TGFAP01135 160 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 PRKACBP22694 351 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 CPT2P23786 658 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 CRHBPP24387 322 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 PMELP40967 661 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 HAAOP46952 286 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 HNRNPA0Q13151 305 aaKnown RBP12.18□□□□□ -0.46
UBE4B-203ENST00000377153 MED22Q15528 200 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 MICBQ29980 383 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 ZNF404Q494X3 552 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 ESCO2Q56NI9 601 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 RNLSQ5VYX0 342 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 XAF1Q6GPH4 301 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 HAGHLQ6PII5 290 aaPredicted RBP12.18□□□□□ -0.46
UBE4B-203ENST00000377153 DCDC5Q6ZRR9 648 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 GLCCI1Q86VQ1 547 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 NANOGP1Q8N7R0 232 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 OR51A4Q8NGJ6 313 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 OR51F2Q8NH61 342 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 ZNF671Q8TAW3 534 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 NPRL2Q8WTW4 380 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 FGGYQ96C11 551 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 CPNE2Q96FN4 548 aaPredicted RBP12.18□□□□□ -0.46
UBE4B-203ENST00000377153 YAE1D1Q9NRH1 226 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 DNAJB11Q9UBS4 358 aa12.18□□□□□ -0.46
UBE4B-203ENST00000377153 MIOXQ9UGB7 285 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms