RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 NKX6-2Q9C056 277 aaPredicted RBP11.36□□□□□ -0.59
USP11-204ENST00000377107 SHARPINQ9H0F6 387 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 CHRDQ9H2X0 955 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 MUC3AQ02505 3323 aa11.36□□□□□ -0.59
USP11-204ENST00000377107 SHANK1Q9Y566 2161 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 ZNF407Q9C0G0 2248 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 XRCC2O43543 280 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 CXCL13O43927 109 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 NXPH3O95157 252 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 PDGFBP01127 241 aaPredicted RBP11.35□□□□□ -0.59
USP11-204ENST00000377107 HPNP05981 417 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 SSR4P51571 173 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 CEBPGP53567 150 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 TAS2R31P59538 309 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 SRSF3P84103 164 aaKnown RBP11.35□□□□□ -0.59
USP11-204ENST00000377107 ZNF273Q14593 569 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 SMCO1Q147U7 214 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 FAM180AQ6UWF9 173 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 OR5AP2Q8NGF4 316 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 DUSP23Q9BVJ7 150 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 DMDP11532 3685 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 IGKV1D-8A0A087WSZ0 117 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 LOC390937A0A1W2PQ73 354 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 H0YIZ8 118 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 MTRF1O75570 445 aaKnown RBP11.35□□□□□ -0.59
USP11-204ENST00000377107 MED6O75586 246 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 OPN5Q6U736 354 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 WBP1Q96G27 269 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 REEP6Q96HR9 211 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 EDEM2Q9BV94 578 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 TGIF2Q9GZN2 237 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 SNAPC5O75971 98 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 SCGNO76038 276 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 GSTP1P09211 210 aaKnown RBP11.35□□□□□ -0.59
USP11-204ENST00000377107 CCL2P13500 99 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 ZNF17P17021 662 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 GRB2P62993 217 aaKnown RBP11.35□□□□□ -0.59
USP11-204ENST00000377107 Q7L0L9 218 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 HOGA1Q86XE5 327 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 DTX1Q86Y01 620 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 SEMA6DQ8NFY4 1073 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 DNASE2BQ8WZ79 361 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 SPTSSAQ969W0 71 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 BORCS8Q96FH0 119 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 CMSS1Q9BQ75 279 aaKnown RBP11.35□□□□□ -0.59
USP11-204ENST00000377107 PIGQQ9BRB3 760 aa11.35□□□□□ -0.59
USP11-204ENST00000377107 A0A0J9YW62 118 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 AQP7P3A6NL99 342 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 SGCEO43556 437 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 LRP3O75074 770 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 CD8AP01732 235 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 GP1BAP07359 652 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 EIF1P41567 113 aaKnown RBP11.34□□□□□ -0.59
USP11-204ENST00000377107 QRFPP83859 136 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 ZNF616Q08AN1 781 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 RPL7L1Q6DKI1 246 aaKnown RBP11.34□□□□□ -0.59
USP11-204ENST00000377107 H3F3CQ6NXT2 135 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 OVCH2Q7RTZ1 564 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 GPR137CQ8N3F9 429 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 OR5L1Q8NGL2 311 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 LYZL4Q96KX0 146 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 ZNF442Q9H7R0 627 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 LHX6Q9UPM6 363 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 HDGFL3Q9Y3E1 203 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 CACNA1GO43497 2377 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 SPTBN2O15020 2390 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 A0A096LPE4 126 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 A0A1W2PPZ6 126 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 TTLL8A6PVC2 850 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 CYCSP99999 105 aaKnown RBP11.34□□□□□ -0.59
USP11-204ENST00000377107 RBM39Q14498 530 aaKnown RBP11.34□□□□□ -0.59
USP11-204ENST00000377107 SWI5Q1ZZU3 235 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 SPIN3Q5JUX0 258 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 WIPI1Q5MNZ9 446 aaPredicted RBP11.34□□□□□ -0.59
USP11-204ENST00000377107 ZFP82Q8N141 532 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 SUMF1Q8NBK3 374 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 OR9K2Q8NGE7 335 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 OR14K1Q8NGZ2 314 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 EDAQ92838 391 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 PECRQ9BY49 303 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 NELFAQ9H3P2 528 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 PCDHB16Q9NRJ7 776 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 CHCHD2Q9Y6H1 151 aaPredicted RBP11.34□□□□□ -0.59
USP11-204ENST00000377107 R4GN57 208 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 IGHV3-64DA0A0J9YX35 117 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 DHRS7CA6NNS2 312 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 OR7C1O76099 320 aaPredicted RBP11.34□□□□□ -0.59
USP11-204ENST00000377107 SFT2D2O95562 160 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 IFNA21P01568 189 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 PRH1P02810 166 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 CPT2P23786 658 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 ECH1Q13011 328 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 PDSS1Q5T2R2 415 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 MOB3CQ70IA8 216 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 SGPP2Q8IWX5 399 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 MAML2Q8IZL2 1156 aaPredicted RBP11.34□□□□□ -0.59
USP11-204ENST00000377107 SLC25A43Q8WUT9 341 aaPredicted RBP11.34□□□□□ -0.59
USP11-204ENST00000377107 ARL11Q969Q4 196 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 TMEM230Q96A57 120 aa11.34□□□□□ -0.59
USP11-204ENST00000377107 PTX4Q96A99 478 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms