RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 A0A1W2PPE3 182 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 FAM157AC9JC47 383 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 H3BMH7 237 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 RER1O15258 196 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 CPT2P23786 658 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 LAP3P28838 519 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 S100A12P80511 92 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 ZNF441Q8N8Z8 693 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 OR51T1Q8NGJ9 327 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 VN1R1Q9GZP7 353 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 SMOC1Q9H4F8 434 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 RPS10P5Q9NQ39 176 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 DNAJB11Q9UBS4 358 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 CACFD1Q9UGQ2 172 aa12.43□□□□□ -0.42
CLCNKA-202ENST00000375692 MYO7BQ6PIF6 2116 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 IGKV1-9A0A0C4DH69 117 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 E9PLN8 166 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 EFNA2O43921 213 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 CFIP05156 583 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 DAOP14920 347 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 ZNF44P15621 663 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 PTGER4P35408 488 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 SULT1A2P50226 295 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 RAB5BP61020 215 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 HGFACQ04756 655 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 FOXF1Q12946 379 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 IAH1Q2TAA2 248 aaPredicted RBP12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 ACTBL2Q562R1 376 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 OR1L3Q8NH93 324 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 TMEM234Q8WY98 164 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 ISOC2Q96AB3 205 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 SERINC1Q9NRX5 453 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 ASH2LQ9UBL3 628 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 FBXL17Q9UF56 701 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 IGKV1D-8A0A087WSZ0 117 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 SGCEO43556 437 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 ZNF806P0C7X5 589 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 RPL12P30050 165 aaKnown RBP12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 OR1D5P58170 312 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 ACY1Q03154 408 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 LCN10Q6JVE6 187 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 OGFOD3Q6PK18 319 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 FAM57BQ71RH2 274 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 C17orf82Q86X59 251 aaPredicted RBP12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 OR56B1Q8NGI3 324 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 HIST1H2BAQ96A08 127 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 LIN37Q96GY3 246 aaPredicted RBP12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 C20orf24Q9BUV8 137 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 B3GAT1Q9P2W7 334 aa12.42□□□□□ -0.42
CLCNKA-202ENST00000375692 WDFY3Q8IZQ1 3526 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 FBLP22087 321 aaKnown RBP12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 PTAFRP25105 342 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 FCGR2CP31995 323 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 ECH1Q13011 328 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 SMCO1Q147U7 214 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 C14orf28Q4W4Y0 310 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 TMEM268Q5VZI3 342 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 EIF5AL1Q6IS14 154 aaKnown RBP12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 BSCL2Q96G97 398 aaPredicted RBP12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 CNTNAP3Q9BZ76 1288 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 OR10A2Q9H208 303 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 B3GALT5Q9Y2C3 310 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 LIPT2A6NK58 231 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 CST4P01036 141 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 SNRNP70P08621 437 aaKnown RBP12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 PET100P0DJ07 73 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 BLVRBP30043 206 aaPredicted RBP12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 DVL1P1P54792 670 aaPredicted RBP12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 TMEM33P57088 247 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 HSD11B2P80365 405 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 RSPO4Q2I0M5 234 aaPredicted RBP12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 HLA-BQ31612 363 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 OR2AJ1Q8NGZ0 328 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 IP6K3Q96PC2 410 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 SCGB3A2Q96PL1 93 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 MRPL13Q9BYD1 178 aaKnown RBP12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 RNF122Q9H9V4 155 aa12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 LSM5Q9Y4Y9 91 aaKnown RBP12.41□□□□□ -0.42
CLCNKA-202ENST00000375692 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 C1orf196B1AJZ1 125 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 K7EPK0 472 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 ADH6P28332 368 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 CLRN1P58418 232 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 RNF4P78317 190 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 EIF2S3LQ2VIR3 472 aaKnown RBP12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 C5orf46Q6UWT4 87 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 FAM71E2Q8N5Q1 922 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 ANKUB1A6NFN9 424 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 C5orf52A6NGY3 159 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 A6NLC8 198 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 RHPN2P1A8MT19 583 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 ZNF878C9JN71 531 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 TAAR5O14804 337 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 ZNF205O95201 554 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 SCGB1D2O95969 90 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 HPNP05981 417 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 FOLR2P14207 255 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 FOLR1P15328 257 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 ARL4DP49703 201 aa12.4□□□□□ -0.42
CLCNKA-202ENST00000375692 CFHR1Q03591 330 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms