RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 KCNG3Q8TAE7 436 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 CD300LFQ8TDQ1 290 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 C5orf34Q96MH7 638 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 KCNK17Q96T54 332 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 CHRDQ9H2X0 955 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 ZNF319Q9P2F9 582 aa13.06□□□□□ -0.32
COL9A2-202ENST00000372748 IGKV3D-11A0A0A0MRZ8 115 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 RHPN2P1A8MT19 583 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 SHISA8B8ZZ34 492 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 FTCDNL1E5RQL4 147 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 IGLV3-19P01714 112 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 OPN1LWP04000 364 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 LAP3P28838 519 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 GUK1Q16774 197 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 DEGS2Q6QHC5 323 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 LHFPL1Q86WI0 220 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 TSTD1Q8NFU3 115 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 OR1L3Q8NH93 324 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 THAP3Q8WTV1 239 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-202ENST00000372748 SRPK3Q9UPE1 567 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 OSGIN2Q9Y236 505 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 VDAC3Q9Y277 283 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 POLR1DQ9Y2S0 133 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 PHF3Q92576 2039 aaKnown RBP13.05□□□□□ -0.32
COL9A2-202ENST00000372748 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 LILRA5A6NI73 299 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 H3BML4 177 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 TSPAN2O60636 221 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 IGHV2-70P01814 119 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 S100PP25815 95 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 CDAP32320 146 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 BIDP55957 195 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 TLE3Q04726 772 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 SMRP1Q8NCR6 262 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 WWTR1Q9GZV5 400 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 GPR84Q9NQS5 396 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 ZNF701Q9NV72 531 aaPredicted RBP13.05□□□□□ -0.32
COL9A2-202ENST00000372748 B3GALT5Q9Y2C3 310 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 MEMO1Q9Y316 297 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 MED12Q93074 2177 aa13.05□□□□□ -0.32
COL9A2-202ENST00000372748 JTBO76095 146 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 ZNF205O95201 554 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 IGHV2-5P01817 119 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 RBMXP38159 391 aaKnown RBP13.04□□□□□ -0.32
COL9A2-202ENST00000372748 HSF1Q00613 529 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 ACY1Q03154 408 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 ACTBL2Q562R1 376 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 C1QL2Q7Z5L3 287 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 CPAMD8Q8IZJ3 1885 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 TDHQ8IZJ6 230 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 SEMA6DQ8NFY4 1073 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 OR51T1Q8NGJ9 327 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 SCGB3A2Q96PL1 93 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 STARD10Q9Y365 291 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 FBXO7Q9Y3I1 522 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 MMACHCQ9Y4U1 282 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 IGKV1D-8A0A087WSZ0 117 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 A6NIZ1 184 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 SNCAP37840 140 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 SULT1A1P50225 295 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 RAP1BP61224 184 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 RAP1AP62834 184 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 RAB30Q15771 203 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 ZNF529Q6P280 563 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 ZDHHC12Q96GR4 267 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 PRRX2Q99811 253 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 OCSTAMPQ9BR26 566 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 ZNF576Q9H609 170 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 ANAPC10Q9UM13 185 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 CFAP54Q96N23 3096 aa13.04□□□□□ -0.32
COL9A2-202ENST00000372748 UMAD1C9J7I0 102 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 ZNF878C9JN71 531 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 IFNA2P01563 188 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 OR13C7P0DN81 318 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 GLI4P10075 376 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 FOLR1P15328 257 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 ZNF600Q6ZNG1 722 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 OR56B1Q8NGI3 324 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 AKR7LQ8NHP1 331 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 FNDC9Q8TBE3 224 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 DAZLQ92904 295 aaKnown RBP13.03□□□□□ -0.32
COL9A2-202ENST00000372748 MRPL24Q96A35 216 aaKnown RBP13.03□□□□□ -0.32
COL9A2-202ENST00000372748 COPS7AQ9UBW8 275 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 FBLN5Q9UBX5 448 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 WDFY4Q6ZS81 3184 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 ZNF17P17021 662 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 THBS4P35443 961 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 EIF2S3P41091 472 aaKnown RBP13.03□□□□□ -0.32
COL9A2-202ENST00000372748 MFAP5Q13361 173 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 CHRFAM7AQ494W8 412 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 C9orf152Q5JTZ5 239 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 SLC22A8Q8TCC7 542 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 TCTEX1D2Q8WW35 142 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 NUDT16L1Q9BRJ7 211 aaKnown RBP13.03□□□□□ -0.32
COL9A2-202ENST00000372748 TCEAL7Q9BRU2 100 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 C14orf166Q9Y224 244 aaKnown RBP13.03□□□□□ -0.32
COL9A2-202ENST00000372748 H3BMH7 237 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 DEDDO75618 318 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 PRH1P02810 166 aa13.03□□□□□ -0.32
COL9A2-202ENST00000372748 GIMD1P0DJR0 217 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms