RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 GSX1Q9H4S2 264 aaPredicted RBP12.49□□□□□ -0.41
COL9A1-204ENST00000370496 RNF7Q9UBF6 113 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 BLOC1S6Q9UL45 172 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 ERGIC3Q9Y282 383 aa12.49□□□□□ -0.41
COL9A1-204ENST00000370496 ZFPL1O95159 310 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 ZNF205O95201 554 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 LY6G6DO95868 133 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 RPSAP08865 295 aaKnown RBP12.48□□□□□ -0.41
COL9A1-204ENST00000370496 IGHV4-31P0DP07 118 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 PMELP40967 661 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 WNT4P56705 351 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 XAF1Q6GPH4 301 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 RPL22L1Q6P5R6 122 aaKnown RBP12.48□□□□□ -0.41
COL9A1-204ENST00000370496 ZNF826PQ6ZT77 177 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 OR10AC1Q8NH08 325 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 LRRC29Q8WV35 223 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 C10orf35Q96D05 121 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 PDCD1LG2Q9BQ51 273 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 MND1Q9BWT6 205 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 CHST5Q9GZS9 411 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 FGF23Q9GZV9 251 aaPredicted RBP12.48□□□□□ -0.41
COL9A1-204ENST00000370496 ZNF665Q9H7R5 613 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 PAK1IP1Q9NWT1 392 aaPredicted RBP12.48□□□□□ -0.41
COL9A1-204ENST00000370496 PCDHB10Q9UN67 800 aa12.48□□□□□ -0.41
COL9A1-204ENST00000370496 PPIAL4EA0A075B759 164 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 ZNF732B4DXR9 585 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 PPIAL4DF5H284 164 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 RGS10O43665 173 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 SERPINA3P01011 423 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 OCM2P0CE71 109 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 OCMP0CE72 109 aaPredicted RBP12.47□□□□□ -0.41
COL9A1-204ENST00000370496 PPIAL4FP0DN26 164 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 CD80P33681 288 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 TAS2R43P59537 309 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 SLC35A2P78381 396 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 CNN3Q15417 329 aaKnown RBP12.47□□□□□ -0.41
COL9A1-204ENST00000370496 TMEM155Q4W5P6 130 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 FAM201AQ5SY85 155 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 TMEM42Q69YG0 159 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 CYB5R2Q6BCY4 276 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 Q71RC1 249 aaPredicted RBP12.47□□□□□ -0.41
COL9A1-204ENST00000370496 KRT74Q7RTS7 529 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 OR5A2Q8NGI9 324 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 OR51A4Q8NGJ6 313 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 TRMT10AQ8TBZ6 339 aaKnown RBP12.47□□□□□ -0.41
COL9A1-204ENST00000370496 NPRL2Q8WTW4 380 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 PP6455Q8WZ26 134 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 RPL3LQ92901 407 aaKnown RBP12.47□□□□□ -0.41
COL9A1-204ENST00000370496 TECTBQ96PL2 329 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 CCDC90BQ9GZT6 254 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 BABAM2Q9NXR7 383 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 ERVK-18Q9QC07 812 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 SLC7A11Q9UPY5 501 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 DHDHQ9UQ10 334 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 PPIAL4AQ9Y536 164 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 ABCA2Q9BZC7 2435 aa12.47□□□□□ -0.41
COL9A1-204ENST00000370496 CDIPTO14735 213 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 CD5LO43866 347 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 IGHV2-5P01817 119 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 CRHBPP24387 322 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 EEF1B2P24534 225 aaKnown RBP12.46□□□□□ -0.41
COL9A1-204ENST00000370496 KRTAP1-1Q07627 177 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 RBM48Q5RL73 367 aaKnown RBP12.46□□□□□ -0.41
COL9A1-204ENST00000370496 WDR82Q6UXN9 313 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 ZFP41Q8N8Y5 198 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 SGCDQ92629 289 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 FGGYQ96C11 551 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 SMIM19Q96E16 107 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 ADAT3Q96EY9 351 aaPredicted RBP12.46□□□□□ -0.41
COL9A1-204ENST00000370496 CDCA4Q9BXL8 241 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 TLNRD1Q9H1K6 362 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 PCDHGB5Q9Y5G0 923 aa12.46□□□□□ -0.41
COL9A1-204ENST00000370496 YLPM1P49750 1951 aaKnown RBP12.46□□□□□ -0.42
COL9A1-204ENST00000370496 ZANQ9Y493 2812 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 PNMA8CA0A1B0GUJ8 204 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 C3orf80F5H4A9 247 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 LALBAP00709 142 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 RPS2P15880 293 aaKnown RBP12.45□□□□□ -0.42
COL9A1-204ENST00000370496 GMFBP60983 142 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 HOXA4Q00056 320 aaPredicted RBP12.45□□□□□ -0.42
COL9A1-204ENST00000370496 KCNJ8Q15842 424 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 HAGHLQ6PII5 290 aaPredicted RBP12.45□□□□□ -0.42
COL9A1-204ENST00000370496 LRRC28Q86X40 367 aaPredicted RBP12.45□□□□□ -0.42
COL9A1-204ENST00000370496 NANOGP1Q8N7R0 232 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 SCCPDHQ8NBX0 429 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 C19orf18Q8NEA5 215 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 DEFB108BQ8NET1 73 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 MSI2Q96DH6 328 aaKnown RBP12.45□□□□□ -0.42
COL9A1-204ENST00000370496 TEP1Q99973 2627 aaKnown RBP12.45□□□□□ -0.42
COL9A1-204ENST00000370496 RASSF4Q9H2L5 321 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 METTL17Q9H7H0 456 aaPredicted RBP12.45□□□□□ -0.42
COL9A1-204ENST00000370496 LPAR2Q9HBW0 351 aa12.45□□□□□ -0.42
COL9A1-204ENST00000370496 FAM230AA0A1W2PPH8 454 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 PQLC2LA1A4F0 135 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 OOEPA6NGQ2 149 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 CEACAM18A8MTB9 384 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 DENRO43583 198 aaKnown RBP12.44□□□□□ -0.42
COL9A1-204ENST00000370496 MT-ND2P03891 347 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 CD2P06729 351 aa12.44□□□□□ -0.42
COL9A1-204ENST00000370496 EGR1P18146 543 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms