RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 TRAM1Q15629 374 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 SPRNQ5BIV9 151 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 Q8TCH9 128 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 CCL17Q92583 94 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 YIPF5Q969M3 257 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 TMEM106AQ96A25 262 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 OPALINQ96PE5 141 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 GPR173Q9NS66 373 aa13.14□□□□□ -0.31
PRPF38B-202ENST00000370022 MAPK3P27361 379 aaPredicted RBP13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 UBE2V2Q15819 145 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 CARTPTQ16568 116 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 ARMCX4Q5H9R4 360 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 LIPKQ5VXJ0 399 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 KCTD8Q6ZWB6 473 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 PHC2Q8IXK0 858 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 DNAAF1Q8NEP3 725 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 OR1M1Q8NGA1 313 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 OR11L1Q8NGX0 322 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 C10orf105Q8TEF2 133 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 SPSB1Q96BD6 273 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 PIMREGQ9BSJ6 248 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 TLNRD1Q9H1K6 362 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 ZCCHC4Q9H5U6 513 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 VCX3AQ9NNX9 186 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 TMEM106BQ9NUM4 274 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 MYO9AB2RTY4 2548 aa13.13□□□□□ -0.31
PRPF38B-202ENST00000370022 LRP5LA4QPB2 252 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 ZNF732B4DXR9 585 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 CLDN25C9JDP6 229 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 GRPP07492 148 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 OCMP0CE72 109 aaPredicted RBP13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 IRF2P14316 349 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 PRKACBP22694 351 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 THBS2P35442 1172 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 SOX2P48431 317 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 GPM6AP51674 278 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 FUT6P51993 359 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 ZNF154Q13106 437 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 RIN1Q13671 783 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 PRAMEF6Q5VXH4 476 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 WDR86Q86TI4 376 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 MOGAT3Q86VF5 341 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 C1orf87Q8N0U7 546 aa13.12□□□□□ -0.31
PRPF38B-202ENST00000370022 PQLC2LA1A4F0 135 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 A6NLC8 198 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 ZNF879B4DU55 563 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 LYNX1G3V0Z9 82 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 SULT1B1O43704 296 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 LYNX1P0DP58 116 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 SLC25A16P16260 332 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 ATF1P18846 271 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 GABRA5P31644 462 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 MPPED2Q15777 294 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 PEG10Q86TG7 708 aaKnown RBP13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 ZNF573Q86YE8 665 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 OR13C5Q8NGS8 318 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 BORCS8Q96FH0 119 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 TIMD4Q96H15 378 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 Q96MF0 132 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 OR14A2Q96R54 314 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 TMED9Q9BVK6 235 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 OR51I2Q9H344 312 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 CKLFQ9UBR5 152 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 CACNG2Q9Y698 323 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 CREBBPQ92793 2442 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 ARID1AO14497 2285 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 IGHV3-64DA0A0J9YX35 117 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 CCRL2O00421 344 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 PSMB9P28065 219 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 CFHR2P36980 270 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 GPR6P46095 362 aaPredicted RBP13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 SYT6Q5T7P8 510 aaPredicted RBP13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 ZNF529Q6P280 563 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 WFDC11Q8NEX6 87 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 OR13C9Q8NGT0 318 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 ZNF420Q8TAQ5 688 aaPredicted RBP13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 PHYHIPQ92561 330 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 RAB1CQ92928 201 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 CPNE2Q96FN4 548 aaPredicted RBP13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 DERL3Q96Q80 235 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 FGF23Q9GZV9 251 aaPredicted RBP13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 UFSP2Q9NUQ7 469 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 C1orf123Q9NWV4 160 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 NDUFB11Q9NX14 153 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 TREM2Q9NZC2 230 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 RNF7Q9UBF6 113 aa13.11□□□□□ -0.31
PRPF38B-202ENST00000370022 TRBV5-7A0A0A0MS05 114 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 IGKV1-9A0A0C4DH69 117 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 FAM230AA0A1W2PPH8 454 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 TRIM64CA6NLI5 447 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 VWC2LB2RUY7 222 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 TMEM178BH3BS89 294 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 CDIPTO14735 213 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 GPX5O75715 221 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 SC5DO75845 299 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 FSTL3O95633 263 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 FSTP19883 344 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 RAB3AP20336 220 aa13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 AZGP1P25311 298 aaKnown RBP13.1□□□□□ -0.31
PRPF38B-202ENST00000370022 PMELP40967 661 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms